comparison abims_xcms_group.xml @ 28:2b676d5eb848 draft

planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit 2cb157bd9a8701a3d6874e084032cbd050b8953e

27:d45a786cbc40

<tool id="abims_xcms_group" name="xcms groupChromPeaks (group)" version="@TOOL_VERSION@+galaxy0">

    <description>Perform the correspondence, the grouping of chromatographic peaks within and between samples.</description>

    <macros>
        <import>macros.xml</import>

                <has_text text="Sample classes: KO, WT" />
            </assert_stdout>
        </test>
        -->
        <!-- from retcor -->
        <test>
            <param name="image" value="faahKO-single-class.xset.merged.group.retcor.RData" ftype="rdata"/>
            <conditional name="methods">
                <param name="method" value="PeakDensity"/>
                <param name="bw" value="5"/>
                <param name="minFraction" value="0.3"/>

28:2b676d5eb848

<tool id="abims_xcms_group" name="xcms groupChromPeaks (group)" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">

    <description>Perform the correspondence, the grouping of chromatographic peaks within and between samples.</description>

    <macros>
        <import>macros.xml</import>

                <has_text text="Sample classes: KO, WT" />
            </assert_stdout>
        </test>
        -->
        <!-- from retcor -->
        <test expect_num_outputs="4">
            <param name="image" value="faahKO-single-class.xset.merged.group.retcor.RData" ftype="rdata"/>
            <conditional name="methods">
                <param name="method" value="PeakDensity"/>
                <param name="bw" value="5"/>
                <param name="minFraction" value="0.3"/>