Mercurial > repos > lecorguille > xcms_summary
comparison abims_xcms_summary.xml @ 29:2a2850fdf29e draft default tip
planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics/ commit 2cb157bd9a8701a3d6874e084032cbd050b8953e
author | workflow4metabolomics |
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date | Mon, 11 Sep 2023 09:23:36 +0000 |
parents | 018a9771de28 |
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28:018a9771de28 | 29:2a2850fdf29e |
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1 <tool id="abims_xcms_summary" name="xcms process history" version="@TOOL_VERSION@+galaxy0"> | 1 <tool id="abims_xcms_summary" name="xcms process history" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> |
2 | 2 |
3 <description>Create a summary of XCMS analysis</description> | 3 <description>Create a summary of XCMS analysis</description> |
4 | 4 |
5 <macros> | 5 <macros> |
6 <import>macros.xml</import> | 6 <import>macros.xml</import> |
39 <param name="image" value="faahKO.xset.group.retcor.group.fillpeaks.RData" ftype="rdata"/> | 39 <param name="image" value="faahKO.xset.group.retcor.group.fillpeaks.RData" ftype="rdata"/> |
40 <output name="htmlOutput" file="faahKO.xset.group.retcor.group.fillpeaks.summary.html" /> | 40 <output name="htmlOutput" file="faahKO.xset.group.retcor.group.fillpeaks.summary.html" /> |
41 </test>--> | 41 </test>--> |
42 <test> | 42 <test> |
43 <param name="image" value="faahKO-single.xset.merged.group.retcor.group.fillpeaks.RData" ftype="rdata"/> | 43 <param name="image" value="faahKO-single.xset.merged.group.retcor.group.fillpeaks.RData" ftype="rdata"/> |
44 <output name="htmlOutput" file="faahKO-single.xset.merged.group.retcor.group.fillpeaks.summary.html" /> | 44 <output name="htmlOutput" file="faahKO-single.xset.merged.group.retcor.group.fillpeaks.summary.html" lines_diff="2"/> |
45 </test> | 45 </test> |
46 </tests> | 46 </tests> |
47 | 47 |
48 <help><![CDATA[ | 48 <help><![CDATA[ |
49 | 49 |
79 CAMERA.annotate ``*``.annotate.*.RData rdata.camera.``*`` | 79 CAMERA.annotate ``*``.annotate.*.RData rdata.camera.``*`` |
80 ========================= =========================== ================================ | 80 ========================= =========================== ================================ |
81 | 81 |
82 | 82 |
83 .. image:: xcms_summary_workflow.png | 83 .. image:: xcms_summary_workflow.png |
84 | |
85 @HELP_XCMS_MANUAL@ | |
84 | 86 |
85 --------------------------------------------------- | 87 --------------------------------------------------- |
86 | 88 |
87 Changelog/News | 89 Changelog/News |
88 -------------- | 90 -------------- |