Mercurial > repos > lecorguille > xcms_xcmsset

comparison abims_xcms_xcmsSet.xml @ 17:ea974024a6c6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 8dfca81480bcbfb5b164ee736b2e2cad324ad8a1-dirty
author lecorguille
date Tue, 02 Oct 2018 09:17:50 -0400
parents b62808a2a008
children 87df3692c68d
comparison
equal deleted inserted replaced
16:d8c59fb7c821 17:ea974024a6c6
143 <expand macro="input_centwave"/> 143 <expand macro="input_centwave"/>
144 <section name="CentWaveAdv" title="Advanced Options" expanded="False"> 144 <section name="CentWaveAdv" title="Advanced Options" expanded="False">
145 <expand macro="input_centwaveAdv"/> 145 <expand macro="input_centwaveAdv"/>
146 </section> 146 </section>
147 <section name="CentWaveAdvROI" title="List of regions-of-interest (ROI)" expanded="True"> 147 <section name="CentWaveAdvROI" title="List of regions-of-interest (ROI)" expanded="True">
148 <expand macro="input_centwaveAdvROI" optional="false" /> 148 <expand macro="input_centwaveAdvROI" optional="true" />
149 <param argument="snthreshIsoROIs" type="float" value="6.25" label="Signal to noise ratio cutoff" help="used in the second centWave run to identify peaks for predicted isotope ROIs." /> 149 <param argument="snthreshIsoROIs" type="float" value="6.25" label="Signal to noise ratio cutoff" help="used in the second centWave run to identify peaks for predicted isotope ROIs." />
150 <param argument="maxCharge" type="integer" value="3" label="Maximal isotope charge" help="Isotopes will be defined for charges ‘1:maxCharge’." /> 150 <param argument="maxCharge" type="integer" value="3" label="Maximal isotope charge" help="Isotopes will be defined for charges ‘1:maxCharge’." />
151 <param argument="maxIso" type="integer" value="5" label="Number of isotope peaks that should be predicted for each peak identified in the first centWave run" /> 151 <param argument="maxIso" type="integer" value="5" label="Number of isotope peaks that should be predicted for each peak identified in the first centWave run" />
152 <param argument="mzIntervalExtension" type="boolean" checked="true" truevalue="TRUE" falsevalue="FALSE" label="Is the mz range for the predicted isotope ROIs should be extended to increase detection of low intensity peaks" /> 152 <param argument="mzIntervalExtension" type="boolean" checked="true" truevalue="TRUE" falsevalue="FALSE" label="Is the mz range for the predicted isotope ROIs should be extended to increase detection of low intensity peaks" />
153 <param argument="polarity" type="select" label="Polarity of the data"> 153 <param argument="polarity" type="select" label="Polarity of the data">