Mercurial > repos > lecorguille > xcms_xcmsset
view test-data/xset.log.txt @ 0:054e4681667c draft
planemo upload
author | lecorguille |
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date | Fri, 07 Aug 2015 10:49:35 -0400 |
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PACKAGE INFO parallel 3.1.1 BiocGenerics 0.12.1 Biobase 2.26.0 Rcpp 0.11.5 mzR 2.0.0 igraph 0.7.1 xcms 1.42.0 snow 0.3.13 batch 1.1.4 ARGUMENTS INFO zipfile /w/galaxy/galaxy4metabolomics/galaxy-dist/database/files/041/dataset_41794.dat xfunction xcmsSet nSlaves 8 method matchedFilter step 0.01 fwhm 4 max 50 snthresh 1 steps 2 INFILE PROCESSING INFO MAIN PROCESSING INFO Starting snow cluster with 8 local sockets. Detecting features in file # 1 : HU_neg_028.mzXML Detecting features in file # 2 : HU_neg_060.mzXML Detecting features in file # 3 : HU_neg_051.mzXML Detecting features in file # 4 : HU_neg_017.mzXML Detecting features in file # 5 : HU_neg_034.mzXML Detecting features in file # 6 : Blanc09.mzXML Detecting features in file # 7 : Blanc06.mzXML Detecting features in file # 8 : Blanc12.mzXML Detecting features in file # 9 : Blanc04.mzXML XSET OBJECT INFO An "xcmsSet" object with 9 samples Time range: 0.7-1140 seconds (0-19 minutes) Mass range: 50.0019-999.9863 m/z Peaks: 135846 (about 15094 per sample) Peak Groups: 0 Sample classes: bio, blank Profile settings: method = bin step = 0.01 Memory usage: 13.8 MB DONE