annotate test-data/out.txt @ 1:845458a694e0 draft default tip

planemo upload
author leomrtns
date Fri, 17 May 2019 09:23:59 -0400
parents e86d1c122ee7
children
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1 General summary:
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2 Mean read length: 144.9
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3 Mean read quality: 27.8
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4 Median read length: 151.0
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5 Median read quality: 28.2
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6 Number of reads: 18,250.0
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7 Read length N50: 151.0
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8 Total bases: 2,645,038.0
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9 Number, percentage and megabases of reads above quality cutoffs
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10 >Q5: 18247 (100.0%) 2.6Mb
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11 >Q7: 18247 (100.0%) 2.6Mb
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12 >Q10: 18247 (100.0%) 2.6Mb
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13 >Q12: 18247 (100.0%) 2.6Mb
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14 >Q15: 18247 (100.0%) 2.6Mb
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15 Top 5 highest mean basecall quality scores and their read lengths
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16 1: 35.8 (151)
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17 2: 35.8 (151)
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18 3: 35.8 (151)
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19 4: 35.8 (151)
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20 5: 35.8 (151)
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21 Top 5 longest reads and their mean basecall quality score
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22 1: 151 (27.3)
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23 2: 151 (32.2)
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24 3: 151 (20.3)
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25 4: 151 (32.5)
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26 5: 151 (22.5)