Mercurial > repos > leomrtns > nanostat
comparison test-data/out.txt @ 0:e86d1c122ee7 draft
initial upload
author | leomrtns |
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date | Tue, 14 May 2019 05:36:34 -0400 |
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comparison
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-1:000000000000 | 0:e86d1c122ee7 |
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1 General summary: | |
2 Mean read length: 144.9 | |
3 Mean read quality: 27.8 | |
4 Median read length: 151.0 | |
5 Median read quality: 28.2 | |
6 Number of reads: 18,250.0 | |
7 Read length N50: 151.0 | |
8 Total bases: 2,645,038.0 | |
9 Number, percentage and megabases of reads above quality cutoffs | |
10 >Q5: 18247 (100.0%) 2.6Mb | |
11 >Q7: 18247 (100.0%) 2.6Mb | |
12 >Q10: 18247 (100.0%) 2.6Mb | |
13 >Q12: 18247 (100.0%) 2.6Mb | |
14 >Q15: 18247 (100.0%) 2.6Mb | |
15 Top 5 highest mean basecall quality scores and their read lengths | |
16 1: 35.8 (151) | |
17 2: 35.8 (151) | |
18 3: 35.8 (151) | |
19 4: 35.8 (151) | |
20 5: 35.8 (151) | |
21 Top 5 longest reads and their mean basecall quality score | |
22 1: 151 (27.3) | |
23 2: 151 (32.2) | |
24 3: 151 (20.3) | |
25 4: 151 (32.5) | |
26 5: 151 (22.5) |