comparison test-data/out.txt @ 0:e86d1c122ee7 draft

initial upload
author leomrtns
date Tue, 14 May 2019 05:36:34 -0400
parents
children
comparison
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-1:000000000000 0:e86d1c122ee7
1 General summary:
2 Mean read length: 144.9
3 Mean read quality: 27.8
4 Median read length: 151.0
5 Median read quality: 28.2
6 Number of reads: 18,250.0
7 Read length N50: 151.0
8 Total bases: 2,645,038.0
9 Number, percentage and megabases of reads above quality cutoffs
10 >Q5: 18247 (100.0%) 2.6Mb
11 >Q7: 18247 (100.0%) 2.6Mb
12 >Q10: 18247 (100.0%) 2.6Mb
13 >Q12: 18247 (100.0%) 2.6Mb
14 >Q15: 18247 (100.0%) 2.6Mb
15 Top 5 highest mean basecall quality scores and their read lengths
16 1: 35.8 (151)
17 2: 35.8 (151)
18 3: 35.8 (151)
19 4: 35.8 (151)
20 5: 35.8 (151)
21 Top 5 longest reads and their mean basecall quality score
22 1: 151 (27.3)
23 2: 151 (32.2)
24 3: 151 (20.3)
25 4: 151 (32.5)
26 5: 151 (22.5)