Mercurial > repos > leomrtns > nanostat
diff test-data/out.txt @ 0:e86d1c122ee7 draft
initial upload
| author | leomrtns |
|---|---|
| date | Tue, 14 May 2019 05:36:34 -0400 |
| parents | |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/out.txt Tue May 14 05:36:34 2019 -0400 @@ -0,0 +1,26 @@ +General summary: +Mean read length: 144.9 +Mean read quality: 27.8 +Median read length: 151.0 +Median read quality: 28.2 +Number of reads: 18,250.0 +Read length N50: 151.0 +Total bases: 2,645,038.0 +Number, percentage and megabases of reads above quality cutoffs +>Q5: 18247 (100.0%) 2.6Mb +>Q7: 18247 (100.0%) 2.6Mb +>Q10: 18247 (100.0%) 2.6Mb +>Q12: 18247 (100.0%) 2.6Mb +>Q15: 18247 (100.0%) 2.6Mb +Top 5 highest mean basecall quality scores and their read lengths +1: 35.8 (151) +2: 35.8 (151) +3: 35.8 (151) +4: 35.8 (151) +5: 35.8 (151) +Top 5 longest reads and their mean basecall quality score +1: 151 (27.3) +2: 151 (32.2) +3: 151 (20.3) +4: 151 (32.5) +5: 151 (22.5)