comparison test-data/SARTools_edgeR_T8vsT4_small.complete.txt @ 0:581d217c7337 draft

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author lgueguen
date Fri, 22 Jul 2016 05:39:13 -0400
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-1:000000000000 0:581d217c7337
1 Id T0.1 T0.5 T0.6 T4.1 T4.2 T4.3 T8.1 T8.2 T8.3 norm.T0-1 norm.T0-5 norm.T0-6 norm.T4-1 norm.T4-2 norm.T4-3 norm.T8-1 norm.T8-2 norm.T8-3 baseMean T0 T4 T8 FC log2FoldChange pvalue padj tagwise.dispersion trended.dispersion
2 CADAFUBG00000001 151 131 183 31 35 44 19 31 18 134 67 134 29 33 49 39 63 34 64.49 112 37 45 1.229 0.297 0.483084442993157 0.536760492214619 0.0936 0.0831
3 CADAFUBG00000002 142 134 153 650 629 783 136 241 151 126 69 112 608 586 877 276 486 282 380.24 102 690 348 0.507 -0.98 0.0143366822573135 0.0286733645146269 0.1097 0.109
4 CADAFUBG00000003 157 147 166 7 10 20 8 10 8 139 76 121 7 9 22 16 20 15 47.28 112 13 17 1.395 0.48 0.357116799789164 0.446395999736455 0.0984 0.0798
5 CADAFUBG00000004 275 249 342 70 44 91 75 64 62 243 128 250 66 41 102 152 129 116 136.33 207 70 132 1.926 0.945 0.0224556086120208 0.037426014353368 0.1064 0.093
6 CADAFUBG00000005 4 5 2 0 0 1 2 2 3 4 3 1 0 0 1 4 4 6 2.49 3 0 5 10.386 3.377 0.00204407258531934 0.00511018146329835 0.0518 0.0534
7 CADAFUBG00000006 2 0 1 0 1 2 7 3 3 2 0 1 0 1 2 14 6 6 3.5 1 1 9 7.734 2.951 0.000272141497083366 0.000907138323611221 0.0614 0.0537
8 CADAFUBG00000007 4 7 3 0 0 0 0 0 0 4 4 2 0 0 0 0 0 0 1.04 3 0 0 1.017 0.024 0.999987137272799 0.999987137272799 0.046 0.0519
9 CADAFUBG00000008 10 16 10 28 12 10 16 33 23 9 8 7 26 11 11 32 67 43 23.88 8 16 47 2.994 1.582 0.000223358535134501 0.000907138323611221 0.0794 0.0697
10 CADAFUBG00000009 12 20 24 74 84 77 10 10 9 11 10 18 69 78 86 20 20 17 36.61 13 78 19 0.246 -2.021 7.39615350340289e-08 7.39615350340289e-07 0.0519 0.0761
11 CADAFUBG00000010 269 262 379 112 132 138 44 33 48 238 135 277 105 123 155 89 67 90 141.97 217 128 82 0.649 -0.623 0.0917606977604112 0.131086711086302 0.0822 0.0938