Mercurial > repos > lgueguen > sartools
diff test-data/SARTools_DESeq2_KOvsWT.complete.txt @ 0:581d217c7337 draft
Planemo upload
| author | lgueguen |
|---|---|
| date | Fri, 22 Jul 2016 05:39:13 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/SARTools_DESeq2_KOvsWT.complete.txt Fri Jul 22 05:39:13 2016 -0400 @@ -0,0 +1,8218 @@ +Id WT1 WT2 KO1 KO2 norm.WT1 norm.WT2 norm.KO1 norm.KO2 baseMean WT KO FoldChange log2FoldChange pvalue padj dispGeneEst dispFit dispMAP dispersion betaConv maxCooks outlier +feat0001 2728 1636 668 2378 1106 970 2553 2595 1806.13 1038 2574 2.451 1.293 5.37519651793256e-23 6.36948912861346e-22 0.0041 0.0086 0.0078 0.0078 TRUE NA NA +feat0002 3169 1892 376 1228 1285 1121 1437 1340 1295.99 1203 1388 1.147 0.198 0.160735832870222 0.21103027167996 0.0056 0.0096 0.0088 0.0088 TRUE NA NA +feat0003 2784 1626 622 2117 1129 964 2377 2311 1695.16 1046 2344 2.212 1.145 2.46807614980336e-17 2.02427530084789e-16 0.0062 0.0088 0.0083 0.0083 TRUE NA NA +feat0004 6311 4283 374 1470 2560 2539 1429 1604 2032.99 2550 1516 0.602 -0.731 1.04715254885587e-08 4.04483408933959e-08 5e-04 0.0083 0.0072 0.0072 TRUE NA NA +feat0005 12769 9132 718 3199 5179 5413 2744 3492 4206.76 5296 3118 0.596 -0.746 1.88312423678069e-08 7.1167767069692e-08 0.0144 0.0072 0.0083 0.0083 TRUE NA NA +feat0006 3953 2867 666 2579 1603 1699 2545 2815 2165.68 1651 2680 1.619 0.695 3.02564035998192e-08 1.12082423279993e-07 0.0024 0.0082 0.0072 0.0072 TRUE NA NA +feat0007 4070 2498 310 1039 1651 1481 1185 1134 1362.51 1566 1160 0.742 -0.431 0.0017821246875128 0.00345101690390565 0.0034 0.0094 0.0083 0.0083 TRUE NA NA +feat0008 2750 2026 257 924 1115 1201 982 1009 1076.72 1158 996 0.863 -0.212 0.134629764575021 0.180478354843489 0 0.0103 0.0086 0.0086 TRUE NA NA +feat0009 2044 1286 118 400 829 762 451 437 619.69 796 444 0.563 -0.829 7.71633809276032e-07 2.40922220777453e-06 0 0.0133 0.0113 0.0113 TRUE NA NA +feat0010 3118 2361 511 1885 1265 1399 1953 2057 1668.57 1332 2005 1.501 0.586 7.73270297819381e-06 2.13511764456237e-05 0.003 0.0088 0.0077 0.0077 TRUE NA NA +feat0011 9296 4990 501 1705 3770 2958 1915 1861 2625.87 3364 1888 0.565 -0.823 5.57421866989203e-09 2.22471048700155e-08 0.014 0.0078 0.0092 0.0092 TRUE NA NA +feat0012 2933 2233 291 1158 1190 1324 1112 1264 1222.28 1257 1188 0.953 -0.07 0.627334194643552 0.684132682312554 0.0056 0.0098 0.0091 0.0091 TRUE NA NA +feat0013 1663 1269 149 582 674 752 569 635 657.82 713 602 0.854 -0.227 0.169838645673078 0.22147840244499 0.0043 0.0129 0.0115 0.0115 TRUE NA NA +feat0014 4406 2749 180 589 1787 1629 688 643 1186.78 1708 666 0.393 -1.347 1.71373115477463e-20 1.75205601922702e-19 0.0029 0.0099 0.0086 0.0086 TRUE NA NA +feat0015 1703 1065 121 457 691 631 462 499 570.79 661 480 0.736 -0.441 0.00980452226009615 0.0165938548810967 0 0.014 0.012 0.012 TRUE NA NA +feat0016 5355 4114 577 2218 2172 2438 2205 2421 2309.07 2305 2313 1.007 0.01 0.938883543814683 0.951058415401352 0.0051 0.0081 0.0075 0.0075 TRUE NA NA +feat0017 14929 9447 739 2554 6055 5599 2824 2788 4316.51 5827 2806 0.485 -1.045 1.17780073804006e-19 1.13220845140625e-18 0.0017 0.0072 0.006 0.006 TRUE NA NA +feat0018 3169 2279 444 1522 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0.0357410690108382 0.0542897189468009 0.018 0.0097 0.0113 0.0113 TRUE NA NA +feat0025 3703 2787 477 1955 1502 1652 1823 2134 1777.63 1577 1978 1.258 0.331 0.0149711165549329 0.024458396710861 0.0073 0.0086 0.0084 0.0084 TRUE NA NA +feat0026 2169 1719 359 1314 880 1019 1372 1434 1176.19 950 1403 1.473 0.559 0.000100797006096178 0.000236102681528341 0.0057 0.0099 0.0091 0.0091 TRUE NA NA +feat0027 6611 4630 853 3233 2681 2744 3260 3529 3053.54 2712 3394 1.251 0.323 0.00598377988474123 0.0105305102696037 0.001 0.0076 0.0063 0.0063 TRUE NA NA +feat0028 10881 8152 1620 6008 4413 4832 6191 6557 5498.4 4622 6374 1.376 0.461 5.09216359828929e-05 0.000125448708854365 0.0025 0.0069 0.0061 0.0061 TRUE NA NA +feat0029 24362 18378 5975 17707 9881 10893 22835 19327 15733.74 10387 21081 2.013 1.009 3.11402648286207e-17 2.53854681672829e-16 0.0092 0.0064 0.0069 0.0069 TRUE NA NA +feat0030 12087 9876 2455 9159 4902 5854 9382 9997 7533.73 5378 9690 1.791 0.841 4.89831858032855e-12 2.69206771156582e-11 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