diff test-data/SARTools_edgeR_KOvsWT.complete.txt @ 0:581d217c7337 draft

Planemo upload
author lgueguen
date Fri, 22 Jul 2016 05:39:13 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/SARTools_edgeR_KOvsWT.complete.txt	Fri Jul 22 05:39:13 2016 -0400
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+Id	WT1	WT2	KO1	KO2	norm.WT1	norm.WT2	norm.KO1	norm.KO2	baseMean	WT	KO	FC	log2FoldChange	pvalue	padj	tagwise.dispersion	trended.dispersion
+feat0001	2728	1636	668	2378	1477	1291	3408	3446	2405.56	1384	3427	2.475	1.307	7.79599543765362e-26	1.05831303253472e-24	0.0066	0.0067
+feat0002	3169	1892	376	1228	1716	1493	1918	1780	1726.7	1604	1849	1.147	0.198	0.130545989349202	0.170384470102199	0.0071	0.0075
+feat0003	2784	1626	622	2117	1508	1283	3173	3068	2257.94	1396	3120	2.231	1.158	1.28625215680723e-19	1.14197945395106e-18	0.007	0.0068
+feat0004	6311	4283	374	1470	3418	3379	1908	2130	2708.84	3398	2019	0.598	-0.742	6.38828918161185e-10	2.62901399067368e-09	0.006	0.0066
+feat0005	12769	9132	718	3199	6915	7205	3663	4636	5604.8	7060	4150	0.591	-0.758	7.60645615828879e-09	2.76804019849896e-08	0.0078	0.007
+feat0006	3953	2867	666	2579	2141	2262	3398	3738	2884.5	2202	3568	1.627	0.702	2.38863904781785e-09	9.24653217780584e-09	0.006	0.0066
+feat0007	4070	2498	310	1039	2204	1971	1581	1506	1815.57	2088	1544	0.737	-0.441	0.000570823894492269	0.00112725654976982	0.0067	0.0073
+feat0008	2750	2026	257	924	1489	1598	1311	1339	1434.49	1544	1325	0.86	-0.218	0.0958207230159633	0.128802610948291	0.0069	0.0083
+feat0009	2044	1286	118	400	1107	1015	602	580	825.82	1061	591	0.555	-0.85	1.85178214020667e-07	5.76552912929317e-07	0.0099	0.0121
+feat0010	3118	2361	511	1885	1689	1863	2607	2732	2222.52	1776	2670	1.507	0.592	1.02538994188499e-06	2.93416438406299e-06	0.0062	0.0068
+feat0011	9296	4990	501	1705	5034	3937	2556	2471	3499.55	4486	2514	0.559	-0.838	8.82828539823182e-10	3.57946026212712e-09	0.0082	0.0066
+feat0012	2933	2233	291	1158	1588	1762	1485	1678	1628.24	1675	1582	0.952	-0.071	0.58779948131871	0.640891567145058	0.0072	0.0077
+feat0013	1663	1269	149	582	901	1001	760	843	876.35	951	802	0.851	-0.233	0.142926841736404	0.184305888476753	0.01	0.0116
+feat0014	4406	2749	180	589	2386	2169	918	854	1581.73	2278	886	0.386	-1.373	4.23989480255885e-24	5.14936842051231e-23	0.0069	0.0078
+feat0015	1703	1065	121	457	922	840	617	662	760.53	881	640	0.73	-0.454	0.0062313222294616	0.0104073416618448	0.0106	0.0128
+feat0016	5355	4114	577	2218	2900	3246	2944	3214	3075.98	3073	3079	1.006	0.008	0.944853812345459	0.954238888593029	0.0064	0.0065
+feat0017	14929	9447	739	2554	8085	7454	3770	3701	5752.48	7770	3736	0.48	-1.057	1.69770028833938e-19	1.4972511966452e-18	0.006	0.007
+feat0018	3169	2279	444	1522	1716	1798	2265	2206	1996.28	1757	2236	1.271	0.346	0.00379338905209705	0.00657868103541138	0.006	0.0071
+feat0019	5456	4062	445	1567	2955	3205	2270	2271	2675.19	3080	2270	0.737	-0.439	0.000218387882478178	0.000458626083715393	0.006	0.0066
+feat0020	9338	6881	650	2420	5057	5429	3316	3507	4327.31	5243	3412	0.652	-0.617	6.87264841393329e-08	2.25451208795214e-07	0.0057	0.0067
+feat0021	7675	6038	961	3697	4157	4764	4903	5358	4795.19	4460	5130	1.153	0.205	0.0888402705782257	0.12037546456307	0.0066	0.0068
+feat0022	4253	2845	326	1495	2303	2245	1663	2167	2094.41	2274	1915	0.853	-0.23	0.0932231524996643	0.125714558083545	0.0081	0.0069
+feat0023	9504	7828	494	1892	5147	6176	2520	2742	4146.32	5662	2631	0.466	-1.1	7.5045755019466e-18	5.85283314882208e-17	0.0071	0.0067
+feat0024	3039	2655	268	1079	1646	2095	1367	1564	1667.87	1870	1466	0.79	-0.341	0.0225952216735988	0.0343418013781962	0.0095	0.0076
+feat0025	3703	2787	477	1955	2005	2199	2433	2833	2367.74	2102	2633	1.261	0.335	0.00785544754854683	0.0129325507551097	0.0069	0.0067
+feat0026	2169	1719	359	1314	1175	1356	1831	1904	1566.66	1266	1868	1.48	0.566	1.94447531192018e-05	4.72603150208525e-05	0.0073	0.0079
+feat0027	6611	4630	853	3233	3580	3653	4352	4685	4067.56	3616	4518	1.252	0.325	0.00331405742323332	0.00581971894079935	0.0054	0.0066
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+feat0033	6894	4943	1636	5734	3734	3900	8346	8310	6072.37	3817	8328	2.182	1.126	2.41245967268691e-22	2.61816053154494e-21	0.006	0.0071
+feat0034	7966	5390	1522	6214	4314	4253	7765	9005	6334.18	4284	8385	1.962	0.972	3.29319012042412e-15	2.10758868929798e-14	0.0069	0.0072
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+feat0036	3536	2344	593	2433	1915	1849	3025	3526	2578.88	1882	3276	1.75	0.807	4.53683717266055e-11	2.0885728997983e-10	0.0065	0.0066
+feat0037	8635	7153	402	1495	4676	5644	2051	2167	3634.35	5160	2109	0.41	-1.287	4.69783068469199e-23	5.35404628892905e-22	0.0072	0.0066
+feat0038	4477	3444	300	1052	2425	2717	1530	1525	2049.22	2571	1528	0.594	-0.751	2.19040743088845e-09	8.51646681951008e-09	0.0064	0.007
+feat0039	6440	5132	596	2329	3488	4049	3041	3375	3488.12	3768	3208	0.855	-0.226	0.0672581095710166	0.0933260529630974	0.0068	0.0066
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+feat0041	3402	2896	247	897	1842	2285	1260	1300	1671.83	2064	1280	0.622	-0.685	1.62434624517133e-06	4.54508419990783e-06	0.0084	0.0076
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+feat0044	4504	2857	327	1305	2439	2254	1668	1891	2063.19	2346	1780	0.764	-0.388	0.00189978503493442	0.00346640350469629	0.0065	0.007
+feat0045	7438	5715	476	1364	4028	4509	2428	1977	3235.57	4268	2202	0.511	-0.968	2.37668736210636e-13	1.31936831580991e-12	0.0075	0.0065
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