# HG changeset patch # User lgueguen # Date 1495012150 14400 # Node ID d86ccac2a66049d6b63f8cf0f37c2a010b97b1df # Parent fe0ee346b17dbe0c2403d51067c3da7c00c86cc4 New release of SARTools (1.3.2) diff -r fe0ee346b17d -r d86ccac2a660 README.md --- a/README.md Wed Apr 26 05:04:18 2017 -0400 +++ b/README.md Wed May 17 05:09:10 2017 -0400 @@ -1,5 +1,5 @@ ----------------------------------------------------------- -SARTools-Galaxy: a galaxy wrapper for SARTools version 1.2.0 +SARTools-Galaxy: a galaxy wrapper for SARTools version 1.3.2 ----------------------------------------------------------- [![Build Status](https://travis-ci.org/PF2-pasteur-fr/SARTools-Galaxy.svg?branch=master)](https://travis-ci.org/PF2-pasteur-fr/SARTools-Galaxy) @@ -12,12 +12,12 @@ Requirements: ------------- - R (3.2.2 or higher), Bio-conductor package - SARTools package (1.2.0) - other R packages: DESeq2 (1.10.0 or higher), edgeR (3.12.0 or higher), genefilter, xtable and knitr + R (3.3.0 or higher), Bio-conductor package + SARTools package (1.3.2) + other R packages: DESeq2 (1.12.0 or higher), edgeR (3.12.0 or higher), genefilter, xtable and knitr Rscript - SARTools 1.2.0 can be downloaded on github (https://github.com/PF2-pasteur-fr/SARTools). More information about installation can be found at this url. + SARTools can be downloaded on github (https://github.com/PF2-pasteur-fr/SARTools). More information about installation can be found at this url. Requirements using Conda: ------------------------- diff -r fe0ee346b17d -r d86ccac2a660 abims_sartools_deseq2.xml --- a/abims_sartools_deseq2.xml Wed Apr 26 05:04:18 2017 -0400 +++ b/abims_sartools_deseq2.xml Wed May 17 05:09:10 2017 -0400 @@ -1,4 +1,4 @@ - + Compare two or more biological conditions in a RNA-Seq framework with DESeq2 diff -r fe0ee346b17d -r d86ccac2a660 abims_sartools_edger.xml --- a/abims_sartools_edger.xml Wed Apr 26 05:04:18 2017 -0400 +++ b/abims_sartools_edger.xml Wed May 17 05:09:10 2017 -0400 @@ -1,4 +1,4 @@ - + Compare two or more biological conditions in a RNA-Seq framework with edgeR diff -r fe0ee346b17d -r d86ccac2a660 macros.xml --- a/macros.xml Wed Apr 26 05:04:18 2017 -0400 +++ b/macros.xml Wed May 17 05:09:10 2017 -0400 @@ -1,8 +1,11 @@ + + 1.3.2 + - r-sartools - r-optparse + r-sartools + r-optparse