Mercurial > repos > lionelguy > package_hmmer_2_3_2

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author lionelguy
date Thu, 15 Aug 2013 04:28:43 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="hmmer" version="2.3.2">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://selab.janelia.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz</action>
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7 <!-- Make -->
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8 <action type="shell_command">./configure --prefix=$INSTALL_DIR --enable-threads</action>
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9 <action type="shell_command">make</action>
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10 <action type="shell_command">make install</action>
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11 <action type="set_environment">
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12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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13 </action>
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14 </actions>
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15 </install>
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16 <readme>
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17 This installs hmmer 2.3.2, the last stable version of the 2.x branch.
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18 See http://hmmer.janelia.org/ for more details. Compiled with --enable-threads for compatibility with rnammer.
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19 </readme>
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20 </package>
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21 </tool_dependency>
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