diff README.md @ 1:bd5771ff6aa3 draft

planemo upload for repository https://github.com/lldelisle/tools-lldelisle/tree/master/tools/omero_hyperstack_to_gastruloid_measurements commit aec2e2ead02236551c1e9c6d333034057daf0bca

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+# OMERO hyperstack to gastruloid measurements
+
+## CHANGELOG
+
+### 20231220
+
+- Add a new parameter: segmentation_method which can be 'ilastik' or 'convert_to_mask'. If 'convert_to_mask' is chosen, it does an autothreshold.
+- The tool_version has been changed from Phase to White
+
+### 20230728
+
+- Add a new parameter: keep_only_largest which allows to keep only the largest ROI for each stack
+
+### 20230727
+
+- Add new parameters (ilastik_label_BG and probability_threshold_BG) to be able to generate a ROI for background.
+- Add XCentroid and YCentroid to the result table
+
+### 20230628
+
+- Change RoiWrapper to ROIWrapper
+
+### 20230623
+
+- Be more robust to OMERO reboot:
+    - 'rescue' allows to only process images which does not have ROIs and tables and generate final table
+    - When making a query to omero repeat it after 0 minutes if it fails and again with 10, 60, 360, 600.
+
+### 20230405
+
+- New parameter 'use_existing' allows to recompute only the spine
+
+### 20230324
+
+First release