annotate test-data/Text_output_for_topGO_analysis.txt @ 0:aade04e750fa draft default tip

planemo upload
author lnguyen
date Fri, 15 Sep 2017 10:38:28 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
1 GO.ID Term Annotated Significant Expected pvalues qvalues
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
2 GO:0045087 innate immune response 1428 35 2.84 6.5e-27 9.28915e-24
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
3 GO:0007268 synaptic transmission 766 20 1.52 7.2e-17 9.35410909090909e-14
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
4 GO:0019933 cAMP-mediated signaling 56 9 0.11 1.2e-15 1.4291e-12
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
5 GO:0050796 regulation of insulin secretion 208 13 0.41 2.6e-15 2.8582e-12
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
6 GO:0007193 adenylate cyclase-inhibiting G-protein c... 75 9 0.15 1.9e-14 1.93949285714286e-11
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
7 GO:1904322 cellular response to forskolin 5 5 0.01 2.3e-14 2.19128666666667e-11
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
8 GO:0007189 adenylate cyclase-activating G-protein c... 84 9 0.17 5.5e-14 4.91253125e-11
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
9 GO:0002223 stimulatory C-type lectin receptor signa... 139 10 0.28 1.1e-13 9.24711764705882e-11
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
10 GO:0006171 cAMP biosynthetic process 139 13 0.28 1.2e-13 9.52733333333333e-11
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
11 GO:0055085 transmembrane transport 1435 25 2.86 3.7e-13 2.78298421052632e-10
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
12 GO:0007596 blood coagulation 590 21 1.17 9.7e-12 6.931135e-09
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
13 GO:0048010 vascular endothelial growth factor recep... 317 11 0.63 1.6e-11 1.0888380952381e-08
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
14 GO:0038095 Fc-epsilon receptor signaling pathway 316 10 0.63 3.9e-10 2.53340454545455e-07
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
15 GO:0030168 platelet activation 263 11 0.52 6.2e-10 3.85235652173913e-07
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
16 GO:2000480 negative regulation of cAMP-dependent pr... 8 4 0.02 9.2e-10 5.47821666666667e-07
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
17 GO:0038096 Fc-gamma receptor signaling pathway invo... 74 6 0.15 6.7e-09 3.829988e-06
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
18 GO:0010881 regulation of cardiac muscle contraction... 19 4 0.04 5.0e-08 2.74826923076923e-05
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
19 GO:0051343 positive regulation of cyclic-nucleotide... 5 3 0.01 7.2e-08 3.81093333333333e-05
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
20 GO:0010800 positive regulation of peptidyl-threonin... 26 4 0.05 1.9e-07 9.69746428571429e-05
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
21 GO:1901841 regulation of high voltage-gated calcium... 8 3 0.02 4.0e-07 0.00019711724137931
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
22 GO:0022400 regulation of rhodopsin mediated signali... 33 4 0.07 5.2e-07 0.00023972
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
23 GO:0001975 response to amphetamine 33 4 0.07 5.2e-07 0.00023972
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
24 GO:0060316 positive regulation of ryanodine-sensiti... 9 3 0.02 6.0e-07 0.000259836363636364
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
25 GO:1901844 regulation of cell communication by elec... 9 3 0.02 6.0e-07 0.000259836363636364
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
26 GO:0007190 activation of adenylate cyclase activity 35 4 0.07 6.6e-07 0.000277413529411765
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
27 GO:0071361 cellular response to ethanol 11 3 0.02 1.2e-06 0.000476366666666667
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
28 GO:0060315 negative regulation of ryanodine-sensiti... 11 3 0.02 1.2e-06 0.000476366666666667
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
29 GO:0032465 regulation of cytokinesis 98 5 0.2 1.4e-06 0.00054074054054054
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
30 GO:0010801 negative regulation of peptidyl-threonin... 13 3 0.03 2.0e-06 0.000752157894736842
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
31 GO:0007611 learning or memory 229 11 0.46 2.1e-06 0.000769515384615385
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
32 GO:0032516 positive regulation of phosphoprotein ph... 15 3 0.03 3.2e-06 0.00111539512195122
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
33 GO:0005513 detection of calcium ion 15 3 0.03 3.2e-06 0.00111539512195122
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
34 GO:0097338 response to clozapine 2 2 0 3.9e-06 0.00132702142857143
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
35 GO:0051447 negative regulation of meiotic cell cycl... 19 3 0.04 6.9e-06 0.00229320697674419
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
36 GO:0031954 positive regulation of protein autophosp... 20 3 0.04 8.1e-06 0.00263084318181818
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
37 GO:0051000 positive regulation of nitric-oxide synt... 21 3 0.04 9.4e-06 0.00298523111111111
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
38 GO:0000186 activation of MAPKK activity 258 6 0.51 1.1e-05 0.00341741304347826
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
39 GO:0043647 inositol phosphate metabolic process 71 4 0.14 1.2e-05 0.00364876595744681
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
40 GO:0051412 response to corticosterone 26 3 0.05 1.8e-05 0.00524975510204082
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
41 GO:0007616 long-term memory 26 3 0.05 1.8e-05 0.00524975510204082
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
42 GO:0005980 glycogen catabolic process 27 3 0.05 2.0e-05 0.0057164
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
43 GO:0002576 platelet degranulation 89 4 0.18 2.9e-05 0.00812625490196078
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
44 GO:0002027 regulation of heart rate 90 4 0.18 3.0e-05 0.00824480769230769
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
45 GO:0046209 nitric oxide metabolic process 94 4 0.19 3.5e-05 0.00943745283018868
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
46 GO:0046777 protein autophosphorylation 231 8 0.46 3.8e-05 0.0100566296296296
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
47 GO:0035556 intracellular signal transduction 2849 30 5.67 4.1e-05 0.0106532909090909
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
48 GO:0018107 peptidyl-threonine phosphorylation 78 8 0.16 4.3e-05 0.0109734464285714
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
49 GO:0019433 triglyceride catabolic process 35 3 0.07 4.5e-05 0.0112823684210526
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
50 GO:0048016 inositol phosphate-mediated signaling 36 3 0.07 4.9e-05 0.0120734310344828
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
51 GO:1901621 negative regulation of smoothened signal... 6 2 0.01 5.7e-05 0.0138065593220339
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
52 GO:0050730 regulation of peptidyl-tyrosine phosphor... 214 5 0.43 6.2e-05 0.0147673666666667
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
53 GO:0042045 epithelial fluid transport 7 2 0.01 8.0e-05 0.0187422950819672
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
54 GO:0044281 small molecule metabolic process 2690 28 5.35 8.4e-05 0.019362
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
55 GO:0018105 peptidyl-serine phosphorylation 237 5 0.47 0.00010 0.022684126984127
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
56 GO:0021762 substantia nigra development 47 3 0.09 0.00011 0.02456265625
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
57 GO:0034351 negative regulation of glial cell apopto... 9 2 0.02 0.00014 0.0307806153846154
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
58 GO:0007411 axon guidance 600 7 1.19 0.00015 0.0324795454545454
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
59 GO:0090330 regulation of platelet aggregation 13 2 0.03 0.00030 0.063989552238806
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
60 GO:0008286 insulin receptor signaling pathway 361 7 0.72 0.00036 0.0745617391304348
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
61 GO:0070588 calcium ion transmembrane transport 205 7 0.41 0.00036 0.0745617391304348
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
62 GO:0071902 positive regulation of protein serine/th... 316 5 0.63 0.00038 0.0775797142857143
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
63 GO:0046827 positive regulation of protein export fr... 15 2 0.03 0.00040 0.080512676056338
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
64 GO:0071380 cellular response to prostaglandin E sti... 17 2 0.03 0.00051 0.0998412328767123
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
65 GO:0035413 positive regulation of catenin import in... 17 2 0.03 0.00051 0.0998412328767123
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
66 GO:0045787 positive regulation of cell cycle 340 5 0.68 0.00053 0.102354459459459
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
67 GO:0006094 gluconeogenesis 84 3 0.17 0.00062 0.118138933333333
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
68 GO:0051592 response to calcium ion 114 6 0.23 0.00077 0.144790394736842
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
69 GO:0043536 positive regulation of blood vessel endo... 22 2 0.04 0.00087 0.16146974025974
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
70 GO:0071364 cellular response to epidermal growth fa... 23 2 0.05 0.00095 0.174057051282051
aade04e750fa planemo upload
lnguyen
parents:
diff changeset
71 GO:0042752 regulation of circadian rhythm 98 3 0.2 0.00097 0.175471772151899