Mercurial > repos > lparsons > cutadapt
comparison cutadapt.xml @ 15:660cffd8d92a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cutadapt commit 11951898f7d8f09a6ad565128832c7717adb25b2
| author | iuc |
|---|---|
| date | Mon, 06 Aug 2018 08:34:03 -0400 |
| parents | c76ee709ffb9 |
| children | 8f1df515eb87 |
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| 14:c76ee709ffb9 | 15:660cffd8d92a |
|---|---|
| 1 <tool id="cutadapt" name="Cutadapt" version="1.16.2" profile="17.09"> | 1 <tool id="cutadapt" name="Cutadapt" version="1.16.3" profile="17.09"> |
| 2 <description>Remove adapter sequences from Fastq/Fasta</description> | 2 <description>Remove adapter sequences from Fastq/Fasta</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 </macros> | 5 </macros> |
| 6 <requirements> | 6 <requirements> |
| 221 </section> | 221 </section> |
| 222 | 222 |
| 223 </inputs> | 223 </inputs> |
| 224 | 224 |
| 225 <outputs> | 225 <outputs> |
| 226 <data name="out1" format="fasta" metadata_source="input_1" from_work_dir="out1*" label="${tool.name} on ${on_string}: Read 1 Output"> | 226 <data name="out1" format="fastqsanger" metadata_source="input_1" from_work_dir="out1*" label="${tool.name} on ${on_string}: Read 1 Output"> |
| 227 <expand macro="inherit_format_1" /> | 227 <expand macro="inherit_format_1" /> |
| 228 </data> | 228 </data> |
| 229 <data name="out2" format="fastqsanger" metadata_source="input_2" from_work_dir="out2*" label="${tool.name} on ${on_string}: Read 2 Output" > | 229 <data name="out2" format="fastqsanger" metadata_source="input_2" from_work_dir="out2*" label="${tool.name} on ${on_string}: Read 2 Output" > |
| 230 <filter>(library['type'] == 'paired' or library['type'] == 'paired_collection')</filter> | 230 <filter>(library['type'] == 'paired' or library['type'] == 'paired_collection')</filter> |
| 231 <expand macro="inherit_format_2" /> | 231 <expand macro="inherit_format_2" /> |