Mercurial > repos > lparsons > package_cutadapt_1_6

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Initial version
author lparsons
date Mon, 06 Oct 2014 14:00:19 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="cython" version="0.20.1">
        <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="cutadapt" version="1.6">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://pypi.python.org/packages/source/c/cutadapt/cutadapt-1.6.tar.gz</action>
                <action type="set_environment_for_install">
                    <repository changeset_revision="c3a8c46fcb97" name="package_cython_0_20_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="cython" version="0.20.1" />
                    </repository>
                </action>
                <action type="shell_command">python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
                <action type="set_environment">
                    <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        </readme>
    </package>
</tool_dependency>