diff galaxy_stubs/AutoModel.xml @ 2:605370bc1def draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/galaxy_stubs/AutoModel.xml	Tue Jul 12 12:33:33 2016 -0400
@@ -0,0 +1,37 @@
+<?xml version='1.0' encoding='UTF-8'?>
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--Proposed Tool Section: [QuEasy (QSAR)]-->
+<tool id="AutoModel" name="AutoModel" version="1.1.0">
+  <description>automatically find best QSAR model</description>
+  <macros>
+    <token name="@EXECUTABLE@">AutoModel</token>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="stdio"/>
+  <expand macro="requirements"/>
+  <command>AutoModel
+
+#if $param_i:
+  -i $param_i
+#end if
+#if $param_o:
+  -o $param_o
+#end if
+#if $param_min_quality:
+  -min_quality $param_min_quality
+#end if
+</command>
+  <inputs>
+    <param name="param_i" type="data" format="dat" optional="False" value="&lt;class 'CTDopts.CTDopts._Null'&gt;" label="input data-file" help="(-i) "/>
+    <param name="param_min_quality" type="float" min="0.0" max="1.0" optional="True" value="0.3" label="minimal desired quality (default: 0.3)" help="(-min_quality) "/>
+  </inputs>
+  <expand macro="advanced_options"/>
+  <outputs>
+    <data name="param_o" format="mod"/>
+  </outputs>
+  <help>This tool tries to automatically find the best QSAR model for a given data set. 
+
+It therefore applies nested validation, including feature selection, for each available model-type. The model with the best nested prediction quality is saved to the specified output file. However, if the best obtained nested prediction quality is smaller than the value specified by '-min_quality', an error will be shown and no model will be saved.
+
+</help>
+</tool>