Mercurial > repos > lxue > ageseq

annotate read_test.fastq @ 4:32c73c20f12f draft

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Deleted selected files
author lxue
date Fri, 15 May 2015 16:43:19 -0400
parents af338b471ed3
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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3
af338b471ed3 read file for testing.
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1 @M00313:155:000000000-G025B:1:1101:16153:1340 1:N:0:2
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2 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAGAAAAAGAAAAAGAA
af338b471ed3 read file for testing.
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3 +
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4 BBABBAAFFFFFGGFGGFGGGAFCBGHHHFGHHFBFGHHHHDHHGHGHHGHHGHHGHGHHEHHFFABG?EFEHEBBGHFGFGHHHHHHGHHHG5FGFFGAFDEGFHG3FGH1FFHHEG/EH0?3GHHEGHHGG4EGHFG2FDGHF?DGBFBH3DF0F?FGF2/CDHGDD1?DD1FGFFFCCCCD;.;.:/C..;C/....
af338b471ed3 read file for testing.
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5 @M00313:155:000000000-G025B:1:1101:16134:1356 1:N:0:2
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6 CTGGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGTCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGATAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGAT
af338b471ed3 read file for testing.
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7 +
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8 ABBBAFFFFFFFGGGGGGGGGGHHGHCHHHHHHHHHHHHHHHHHHGHHHHHGGGEGGGHHHHHHHHHHHHHHHHGHHHHHGHHHHHHHHHHHFGHHHHHHHHHHHHHHHHHHGHHHGHHGGHHGGHHHHHHHHHGGGHHHHHHHHHHHHHHHHHGHHHHEHGGHHHHHHGGGHHHGGHHHHHGGCCGFHHHHHHGGCGG<
af338b471ed3 read file for testing.
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9 @M00313:155:000000000-G025B:1:1101:14989:1390 1:N:0:2
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10 CGTCCCGCAAGTTAAATATGAAAATGAAAACGGTAGAGGTATTTTACCGACCGTTACCGACCGTTTTCATCCCTAATTATAAGACATTGATAGATTTGATAGATAAAATCATAAAAGTCTACGCATTCTTATGAATCACTAGTGAATTCGCGGCCGGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTC
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11 +
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12 >AAA1A@>DD1BEBGGGBGFGGHCGGFEGHHGGEHCHHHHCFHHHHGHFGGG?EEFGHG/>EEEFFEHHHHHHGD0FGFHBGGBFHHHHHFHFHGGGGHHHHHHHHHFGHHHHHHHHHHHHHGGGGGHHHHHDDFHHHHHHGHFHHHHHGGCCGGGGGGGEEGFGFGGHHHHGGHHEHHHGGGGF;FFGGGGGEFGFGGG
af338b471ed3 read file for testing.
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13 @M00313:155:000000000-G025B:1:1101:16401:1701 1:N:0:2
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14 TTTGCCGAAACTCACCTCATATCTCGGAAGGGCGCTGCTGGGTTATTTTTGGGCATCAAGAAAGGCGATGTAATCATGACCCTGCTCCAAAACTACCCAGAATTCGTCGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACAACAGTCACAGTACAATG
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15 +
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16 AAAAAF?1>ADFFGCFGCG1FGB3FCCEFC000AE?/E111/BB/DGGFHCGGHFHHH1@GFG10B//>/BBGFHFHBBB10G0>FBGFHBG0>FCB0B/?BD1B/BEEEAA/<CFCFFFFF0FCC<0<1?G1DCG1@GHHGDGHGGFD1<G0..0>10-<A.<GDGFGHC.;0C:--;A@A..;./000000000000/
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17 @M00313:155:000000000-G025B:1:1101:15892:1694 1:N:0:2
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18 TTTGCCGAAACTCACCTCATATCTCGGAAGGTCGCTGCTGGGTTATTTTTGGGCATCAAGAAAGGCGATGTAATCATGACCCTGCTCCAAAACTGCCCAGAATTCGTCGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAACAAACATAGAATGAAAT
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19 +
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20 BBBBBFBDBBBFGGGGGGGGGGHGHHGGGGGGFFGFGEGHHGGFEHHHHHGGGHHGHHGHHFHGHHGGGGHFFBHHGGFHHHHFHHHHHGHHHHEGFHFFGHHHHGHGGCGHGD<FGAGFHHHHGHHHGHHFGHHHHHHHHHGHHHHHHDHFHGDHHHHGEGHGHHEHHHE.CHGHCGCF-;;9;....09000;//9//
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21 @M00313:155:000000000-G025B:1:1101:18648:2005 1:N:0:2
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22 GGCAATTGCTAAGTCACCTGATCTTGACAAGCATGACTTGTCTTCTTTGAGGATGATAAAAGAGGGGCTCCATTGGGCAAGGAACTTGAAGATACTGTCAGAGCTAAGTTTCCTCAGGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACAGAAGGACA
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23 +
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24 BBBBBFFFFFFFGGGGCGGGGGGBHHHHHHHHFGGHHHHHHHHHHHHHHGGHHHHHHHGHHHGHHGGGGHGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH3GHHHHGGHHHGHHHHHHHFGGG/GHHHHHHGHHHGHHHHHGHHHHHHHHHHHHGHBHHFFGHHHGGGGHGHHHGHGHHHHHHGFGAA:./::/.../
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25 @M00313:155:000000000-G025B:1:1101:14258:1422 1:N:0:2
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26 GGCAATTGCCAAGTCACCTGATCTTGATAAACATGACTTGTCTTCGTTGAGGATGTTGAAGTCTGGAGGGTCGCCGTTGGGGAAGGAGCTTGAAGATACTGTCAGAGCTAAGTTTCCTCAGGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAATCACA
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27 +
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28 CCCCCFFFFFFFGGGGGGGGGGHHHGHHHHHHBGHHHHHHHHHHHHHHHHHHGHHHHIIHHHHHHHHHGGGHFGGGGGGHGGGGGGHHHHHFHHHHGHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGHHHHHHHGHHFGGHHHHHHHHHHHHHHHHHHG1GHHGGHHHHGEGHGHHHHHHHHHHHHGGGG?D.0990
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29 @M00313:155:000000000-G025B:1:1101:16582:1722 1:N:0:2
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30 GGCAATTGCCAAGTCACCTGATCTTGATAAACATGACTTGTCTTCGTTGAGGATGTTGAAGTCTGGAGGGTCGCCGTTGGGGAAGGAGCTTGAAGATACTGTCAGAGCCAAGTTTCCGCAGGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAACAAAA
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31 +
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32 BBBBBFFBFFFFGGGGGGGGGGHHHHHGHHHHBGEGHHGHGHHHHGHHHHHHFHHHH5AHHHFHHHHF?0FGGGGGEFGHGGAFG1FGFFHHHHHHHGHHHHHHHH33GHFGGGBGGCEFE?CGC/?/FDH0GFHHHGGEHFHHFHHHHHHHHHHHBGHGHF1DD0>CGFHD?EDGGHHGGHGHHFHCGG-A?B?9:.9.
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33 @M00313:155:000000000-G025B:1:1101:14342:1402 1:N:0:2
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34 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAAATCAACCAG
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35 +
af338b471ed3 read file for testing.
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36 BBBABABFFFFFGGGFACFFGB54FAGCGHHHHG5FG3GHHDGHHDFFCFHH5AFGFHHHHHHDGFEFGGCGFHHHGHFHGHFHGHHHEFGGD4FG?FFEGHHHHHHFGGCEGHHHGGGGFHHHHHH?GHHGHEHHHHFFHHHHHHHHHGEGFHHHGGHHHHCGGHGHHHHHHHGHHHFGCCGG@;-;;---9//9/9..
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37 @M00313:155:000000000-G025B:1:1101:15477:1458 1:N:0:2
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38 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAACAAAAAAAGGAAA
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39 +
af338b471ed3 read file for testing.
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40 BBBBBBBFFFFFGGGGGGGGGGHHHHHHHGHHHHHFHGHHHGHHHFHGHGHHHHHHHHHHHHHHFFGGGGGGHGHHHGHFGGGHHHGHHHFGHFFHGFFHHGHHHHH1EEGGGHHHGGGE?CGHFHHCGHHGGHHHHGGHHHHH2>FGHHHEDHDGCEHHH1CEGHGHHHHHHHHHBGHGGGGGGG9.;;C:EAA...99
af338b471ed3 read file for testing.
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41 @M00313:155:000000000-G025B:1:1101:16772:1421 1:N:0:2
af338b471ed3 read file for testing.
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42 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAATCTTCAAATTACA
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43 +
af338b471ed3 read file for testing.
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44 CCCCBBBFFFFFGGGGGGGGGGHHHGHHHGHHHHFGHHHHHHHHHHGHHGHHHHHHHHHHGHHFFGEFGGAFGFGHGHHHHHHHHHGHHHHHHGGHEGGHH4GHHHHFFHFGHHHEGGGGGFFHHFHGHHHGHHHHHHHGHHGHHHGHHFHHHHHHFGHHHHGGGHGHHHHHHHHHGHHGGGGFF:;.;000;0;0000;
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45 @M00313:155:000000000-G025B:1:1101:14889:1465 1:N:0:2
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46 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAGCACCACCCTG
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47 +
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48 BBBBBBBFFFFFGGGGGGGGGGHGHHHHHHHHHHHHHHHHHHHHHHHHHGHHHHHHGHHHHFGHHHGGGGGGHHHHGHHHHHHHHHHHHHHHHHFHGGGHHHHHHHHHGGGGGHHHGGGGFHHHHHHGHHHGGHHHHHHHHHHHHHHHHHGHHHHHGDHHHHGGGHGHHHHHHHFHHGHGGGG-B---;..;9A......
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49 @M00313:155:000000000-G025B:1:1101:14829:1477 1:N:0:2
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50 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAATACCTATCCAA
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51 +
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52 AAAAAAAFFFFFFGF1ABFFDGFGGHHCA11A3F3BBBFFHGBGHE11FGFD1BF1F0BE2DDD1FEFGGAECFBG1F1FFFHHBFHHHHEHHFHHGGGHGHHHHFHHHHFAFFHGG/FGHHHHHHHEHHHGEGHHHHHHHHHHGHHHHHGHFHHHGGHGHHGGGGGHHHHHHHHFHHHCGGGG@----.0000000:;0
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53 @M00313:155:000000000-G025B:1:1101:13459:1557 1:N:0:2
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54 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAAGACAATCTCAA
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55 +
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56 CCCCCCCFFFFFGGGGGGGGGGHHHHHHHHHHHHGHHHHHHHHHHHHHHGHHHHHHHHHHHHHGHHGGGGEGHHHHHHHHHHHHGHHHHHFHHHHHGGGHHHHHHHHHHHHHHHGGGGHHGFHFHGHHHGHHHHHHHHHHHHGHGHHHHHFGHHGGHHHHFGGHGHHEFHHGHHHHHGGGG@;--9:--../:/:00000
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57 @M00313:155:000000000-G025B:1:1101:14794:1599 1:N:0:2
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58 CCCCTGCATTCATACGTTCTTGAAAACTTGTCTAACCATTCATCAAAACCTTGCCTGATAAATGGCGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAGAAATCAACTCA
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59 +
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60 BBBBBAAFFFFBGFGGGGGGFFGHHHHHHHHHGHGHHCHHHHHHHHHHHGHGHGHHHFHHHGHFFHGGGGGGHGHHHHHHHHHHHHHHHHHHHHFHGGGHHHHHHHHHGGGGGHHHGGGGHHHHHHHGHHHGHHHHHHHHHHHHHHHHHHGHGHHHGGHGHHC.CHGHHHHFHHHHHHE-CFGGB--:..9/0900/;0;
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61 @M00313:155:000000000-G025B:1:1101:15192:1460 1:N:0:2
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62 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAGGAAGATCCCG
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63 +
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64 BBBBBBAFFFFFGFGGGGGGGGGHGHHHHFGFHHFHHHHHFFHHGHHGFGHHHGHFGFHHHFHHFHBHGGGGGHHHHHHFHHHHHHGHHHHHFF5GGCFHHHHEHHHHGGGGF3GHGGEGHFHGHHHGHHHCHGFHHHBGFGHHHHHHHHHGDFHHFDHHHGGGGHEGHHHHHHHGBDFD?@CG:-;@-..9/.=000/.
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65 @M00313:155:000000000-G025B:1:1101:16608:1508 1:N:0:2
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66 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAACAACTCAAAAAAAAA
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67 +
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68 BBBBBBBFFFFFGGGGGGGGGG2GGHHHHHHHHHHHHHHHHHHHHHHGHGHHHHHHHHHHHHHHHGHHGGGGHHHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHGGGGGHHHGGGGGHHHHFHGHHHGGHHHHHGHHHHHHHHHHEGHFHHHGGHHHHGGGHGHHHHHHHGHHGGDGCGGG..;./90;099----
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69 @M00313:155:000000000-G025B:1:1101:13331:1593 1:N:0:2
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70 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAAAACAATATCG
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71 +
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72 BBBAA?AFFFFFGGGGGGGGGGEHHHHGHCHHHGHHHHHHHDHHGHHHFFHHFHHHHHHHEHHHHFHHCGEGHHHHHGHHHHHHGHHHHGHHHGHHGFGHEHHHHHHHHGHHHFGHDEEGFGEGHHHCHHHFHHHHHHHGHHHHHHHHHHHHFDGFFGHFHHGGGHGHHHHHHGFBDGFGGF-CD---;;-9:.90///:
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73 @M00313:155:000000000-G025B:1:1101:17753:1644 1:N:0:2
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74 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACAGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAGAAAAACAAAA
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75 +
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76 BBBBBBBFFFFFGGGGGGGGGCFHHHHFHFHGHCHHHCHHHHHHHHHHHGHHHHHHHHGHFHHHHFHHFGCFGHHHGHHHHHGHHHHHHFHHHHHGGGGHHHGHHHHHHAHHHHHHGGEFHHHHFHHGHHHGHHHHHHHHHGHHHHHHHHHEFFHHFFHHHHGGGHGGHHHHHHHHHHHGGGGG@-;:;...;/9:A:.F
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77 @M00313:155:000000000-G025B:1:1101:18234:1657 1:N:0:2
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78 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAACTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAAGAGAAATCAAA
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79 +
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80 BBBBBBBFFFFFFGGGFGGGGGGHHHHHHHHHHHHFHHHHHGHHHHHGHGHHHHHHGHHHFHHHFGHHCFCGHHEFFGEHHHHHFHHGHHFHHHHHGGGHHHHHHHHHGGCGGHHGGGGGHHHHHHHGHHHGHHHHHHHGHHHHHHHHHHHHGHHHGGHHHHGGGHGHHHHHHGHHFHHGGGCGG:;-9..;/:C00;90
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81 @M00313:155:000000000-G025B:1:1101:12691:1794 1:N:0:2
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82 CCCCTGCATTCATACGTTTTTGAAAACTTGTCTAAACATTCATCAAAACCTTGCCTGATAAATGGTGCGAATGGAGATGTCTACACCTATGCTGACGTTGAGCTCACGGCAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAAAACGAAAACACAC
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83 +
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84 CCCCBBBFFFFFGGGGGGGGGGGHHHHHHHHHHHHHHHHHHHHHHHDHHGHHGHHHHHHFFHHHGHHHGGGGHHHGHHHHHHHHHHHHHHHHHHGHEFGGHHGHHHHGGGGGGHHHGGGGGGHHHHHGHHHGGHHHHHHHHHHHHHHHHFHHFHHGFGHFHHGFGHGHHEHHHGHHHHHCGGG@--;--.-.9.-/;...
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85 @M00313:155:000000000-G025B:1:1101:16102:1419 1:N:0:2
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86 CTTACCCCTATTAAATGTGCATGACACACCAGTGAAACCCCCATTGTGACTGGCCTTATGAAATAAATTTTAGTAAAACGTGCAATGAATCGACGTCATCACTGTAAACAAAAATAAAGACAATGAAACATACAAATGCATTTCAAAAACAAACACAACCCATCAGAACTCATGACCAAATCATAAACAAAAAATTGAAA
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87 +
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88 BBBBBFFBBAFFGGGGGGGGGGCHHHHHGGDFFHHGHHGGGGGHHHFHHHHHHGHHHHHFFFHGHHHHHGHFHEBGFHHGGGEHHHHHHGBFHEC/EFGHHHHHFHHHHHHHHHHHHHHHGHHHHHHHHHGHHHHHHHHHHH4HHHHHHGHHHHGFGGDEGFGHHHHGGGDHHHHFFHHHHFHFGHHGHHHHHG.GGHDD
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89 @M00313:155:000000000-G025B:1:1101:14522:1426 1:N:0:2
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90 CTTACCCCTATTAAATGTGCATGACACACCAGTGAAACCCCCATTGTGACTGGCCTTATGAAATAAATTTTAGTAAAACGTGCAATGAATCGACGTCATCACTGTAAACAAAAATAATCACTAGTGAATTCGCGGCCGGATCGGAAGAGCACACGTCTGAACTCCAGTCACTTGTTGATCTCGTATGCCGTCTTCTGCTT
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91 +
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92 DDDDDFFDCBFFGGGGGGGGFGHHHHHHGGHHHHGHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGHHGHHHHHHHHHHHHHGGGGGHHHHHHHHHGHHHHHHHHHHHHHHHHHHHHHHHGGGGGGGGGGGGGGGGHHHHHHHGHHHGHHHHHHHHHHHHHHHHHHHH0GHHGC;CHHACEGGHGEHGE