Mercurial > repos > lz_hust > gatktools
diff test-data/gatk/gatk_count_covariates/gatk_count_covariates_out_1.log.contains @ 15:01ff8dd37d4d draft default tip
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author | lz_hust |
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date | Sat, 01 Jun 2019 07:20:41 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/gatk/gatk_count_covariates/gatk_count_covariates_out_1.log.contains Sat Jun 01 07:20:41 2019 -0400 @@ -0,0 +1,13 @@ +GenomeAnalysisEngine - Strictness is SILENT +CountCovariatesWalker - The covariates being used here: +CountCovariatesWalker - ReadGroupCovariate +CountCovariatesWalker - QualityScoreCovariate +CountCovariatesWalker - CycleCovariate +CountCovariatesWalker - DinucCovariate +CountCovariatesWalker - HomopolymerCovariate +CountCovariatesWalker - MinimumNQSCovariate +CountCovariatesWalker - PositionCovariate +TraversalEngine - [INITIALIZATION COMPLETE; TRAVERSAL STARTING] +CountCovariatesWalker - Writing raw recalibration data... +CountCovariatesWalker - ...done! +TraversalEngine - Total runtime