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view test-data/gatk/gatk_print_reads/gatk_print_reads_out_1.log.contains @ 15:01ff8dd37d4d draft default tip

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author lz_hust
date Sat, 01 Jun 2019 07:20:41 -0400
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SAMDataSource$SAMReaders - Initializing SAMRecords in serial
TraversalEngine - [INITIALIZATION COMPLETE; TRAVERSAL STARTING]
TraversalEngine -        Location processed.reads  runtime per.1M.reads completed total.runtime remaining 
Walker - [REDUCE RESULT] Traversal result is: org.broadinstitute.sting.gatk.io.stubs.SAMFileWriterStub
TraversalEngine - 0 reads were filtered out during traversal out of 10 total (0.00%)