Mercurial > repos > malbuquerque > delly

comparison package/tool_dependencies.xml @ 1:5f241f2398c3 draft

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author malbuquerque
date Tue, 20 Jan 2015 14:21:53 -0500
parents ace1798624b4
children 3bc83ccf41a4
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0:ace1798624b4 1:5f241f2398c3
12 <package name="seqtk" version="1.0.0"> 12 <package name="seqtk" version="1.0.0">
13 <repository changeset_revision="35f0f4568ded" name="package_seqtk_1_0_0" owner="malbuquerque" toolshed="https://toolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="35f0f4568ded" name="package_seqtk_1_0_0" owner="malbuquerque" toolshed="https://toolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 15
16 <package name="delly" version="0.6.1"> 16 <package name="delly" version="0.6.1">
17 <install version="1.0.0"> 17 <install version="1.0">
18 <actions> 18 <actions>
19 <action type="download_by_url">https://github.com/tobiasrausch/delly/archive/v0.6.1.tar.gz</action> 19 <action type="download_by_url">https://github.com/tobiasrausch/delly/archive/v0.6.1.tar.gz</action>
20 <action type="download_by_url">https://github.com/morinlab/galaxy_tools/delly/Makefile</action> 20 <action type="download_by_url">https://github.com/morinlab/galaxy_tools/delly/Makefile</action>
21 <action type="shell_command">make all BOOST_ROOT=\$BOOST_ROOT BAMTOOLS_ROOT=\$BAMTOOLS_ROOT SEQTK_ROOT=\$SEQTK_ROOT</action> 21 <action type="shell_command">make all BOOST_ROOT=\$BOOST_ROOT BAMTOOLS_ROOT=\$BAMTOOLS_ROOT SEQTK_ROOT=\$SEQTK_ROOT</action>
22 <action type="move_directory_files"> 22 <action type="move_directory_files">