# HG changeset patch # User malbuquerque # Date 1421783091 18000 # Node ID 3bc83ccf41a4ccf9231c32035160e43b8b8b2a2b # Parent 5f241f2398c3b283b2e1b63f7d4881f89202c083 Uploaded diff -r 5f241f2398c3 -r 3bc83ccf41a4 package/tool_dependencies.xml --- a/package/tool_dependencies.xml Tue Jan 20 14:21:53 2015 -0500 +++ b/package/tool_dependencies.xml Tue Jan 20 14:44:51 2015 -0500 @@ -17,7 +17,11 @@ <install version="1.0"> <actions> <action type="download_by_url">https://github.com/tobiasrausch/delly/archive/v0.6.1.tar.gz</action> - <action type="download_by_url">https://github.com/morinlab/galaxy_tools/delly/Makefile</action> + <action type="download_by_url">https://github.com/morinlab/galaxy_tools.git</action> + <action type="move_directory_files"> + <source_directory>./galaxy_tools/delly/Makefile</source_directory> + <destination_directory>.</destination_directory> + </action> <action type="shell_command">make all BOOST_ROOT=\$BOOST_ROOT BAMTOOLS_ROOT=\$BAMTOOLS_ROOT SEQTK_ROOT=\$SEQTK_ROOT</action> <action type="move_directory_files"> <source_directory>.</source_directory>