Mercurial > repos > malbuquerque > delly
changeset 4:aedebcf9d2c2 draft
Uploaded
| author | malbuquerque |
|---|---|
| date | Tue, 20 Jan 2015 14:59:12 -0500 |
| parents | b833f6538a4c |
| children | f7f19d0255e0 |
| files | package/tool_dependencies.xml |
| diffstat | 1 files changed, 2 insertions(+), 6 deletions(-) [+] |
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--- a/package/tool_dependencies.xml Tue Jan 20 14:49:12 2015 -0500 +++ b/package/tool_dependencies.xml Tue Jan 20 14:59:12 2015 -0500 @@ -1,7 +1,7 @@ <?xml version="1.0"?> <tool_dependency> - <package name="boost" version="1.53"> + <package name="boost" version="1.53.0"> <repository changeset_revision="cee17eb9de41" name="package_boost_1_53" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> @@ -17,11 +17,7 @@ <install version="1.0"> <actions> <action type="download_by_url">https://github.com/tobiasrausch/delly/archive/v0.6.1.tar.gz</action> - <action type="shell_command">git clone https://github.com/morinlab/galaxy_tools.git</action> - <action type="move_directory_files"> - <source_directory>./galaxy_tools/delly/Makefile</source_directory> - <destination_directory>.</destination_directory> - </action> + <action type="download_by_url">https://raw.githubusercontent.com/morinlab/galaxy_tools/master/delly/Makefile?token=AKBWDhpiQthVaz3plMQkg4ACAPGEQK1Wks5Ux-25wA%3D%3D</action> <action type="shell_command">make all BOOST_ROOT=\$BOOST_ROOT BAMTOOLS_ROOT=\$BAMTOOLS_ROOT SEQTK_ROOT=\$SEQTK_ROOT</action> <action type="move_directory_files"> <source_directory>.</source_directory>