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annotate conf/tool_conf.xml @ 0:e979cb57a5d5 draft default tip

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"planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
author malex
date Thu, 14 Jan 2021 21:51:36 +0000
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e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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1 <section id="bayesase" name="BayesASE">
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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2 <tool file="BayesASE/galaxy/tools/BWASplitSAM_2output.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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3 <tool file="BayesASE/galaxy/tools/calculate_priors_from_ase_count_tables.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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4 <tool file="BayesASE/galaxy/tools/check_aln_design_file.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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5 <tool file="BayesASE/galaxy/tools/check_comparate_design_file.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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6 <tool file="BayesASE/galaxy/tools/check_for_lost_reads.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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7 <tool file="BayesASE/galaxy/tools/check_samcomp_for_lost_reads.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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8 <tool file="BayesASE/galaxy/tools/check_sam_present.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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9 <tool file="BayesASE/galaxy/tools/combine_cnt_tables.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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10 <tool file="BayesASE/galaxy/tools/count_starting_reads.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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11 <tool file="BayesASE/galaxy/tools/create_sam_file_with_features.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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12 <tool file="BayesASE/galaxy/tools/drop_reads_that_doNot_overlap_after_BEDtools_intersect.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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13 <tool file="BayesASE/galaxy/tools/merge_comparates_and_gen_headers_for_bayesian.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
malex
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14 <tool file="BayesASE/galaxy/tools/merge_priors_to_comparate.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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15 <tool file="BayesASE/galaxy/tools/NBmodel_stan2_galaxy.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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16 <tool file="BayesASE/galaxy/tools/reformat_bedfile.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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17 <tool file="BayesASE/galaxy/tools/reformat_sample_design_file.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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18 <tool file="BayesASE/galaxy/tools/sam2bed.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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19 <tool file="BayesASE/galaxy/tools/sam_compare_w_feature.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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20 <tool file="BayesASE/galaxy/tools/summarize_sam_compare_cnts_table_1cond.xml" />
e979cb57a5d5 "planemo upload for repository https://github.com/McIntyre-Lab/BayesASE/tree/main/galaxy commit 9b70598ef46a73632d9e0fa0c6ce6776fb5e9d6a"
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21 </section>