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directory /test-data/align_and_counts_test_data/ @ 0:e979cb57a5d5 draft default tip

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file ASE_counts_table_BASE_test_data.tsv 352 -rw-r--r--
file ASE_totals_table_BASE_test_data.tsv 921 -rw-r--r--
file BASE_testData_BEDfile.bed 116 -rwxr-xr-x
file W1118_G1_BWASplitSAM_summary.tabular 190 -rw-r--r--
file W1118_G1_create_new_SAM_file_with_features_BASE_test_data.sam 479476 -rw-r--r--
file W1118_G1_unique_sam_for_BASE.sam 467248 -rw-r--r--
file W1118_SAM2BED_for_BASE.bed 34434 -rw-r--r--
file W55_G2_BWASplitSAM_summary.tabular 190 -rw-r--r--
file W55_G2_create_new_SAM_file_with_features_BASE_test_data.sam 479442 -rw-r--r--
file W55_G2_unique_sam_for_BASE.sam 467494 -rw-r--r--
file W55_M_1_1.fastq 366493 -rwxr-xr-x
file alignment_design_file.tsv 1013 -rwxr-xr-x
file bam_to_sam_BASE_test_data.sam 488286 -rw-r--r--
file bedtools_intersect_intervals_BASE_test_data.bed 85342 -rw-r--r--
file check_SAM_compare_for_lost_reads_BASE_test_data.tabular 125 -rw-r--r--
file check_SAM_present_BASE_test_data.tabular 58 -rw-r--r--
file check_for_lost_reads_BASE_test_data.tabular 145 -rw-r--r--
file drop_nonintersecting_reads_for_BASE.tabular 85311 -rw-r--r--
file number_rows_left_after_remove_reads_G2.tabular 205 -rw-r--r--
file number_rows_left_after_removed_reads.tabular 75 -rw-r--r--
file reformat_BED_file_for_BASE.bed 116 -rw-r--r--