Mercurial > repos > mandorodriguez > concat_fasta_files
comparison concat_fasta_files.xml @ 0:fe8aed46e026 draft default tip
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author | mandorodriguez |
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date | Mon, 28 Sep 2015 13:19:32 -0400 |
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-1:000000000000 | 0:fe8aed46e026 |
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1 <tool id="concat_fasta_files" name="Concat fasta files" version="1.0.0"> | |
2 <description>Concatenates fasta files you select from your history</description> | |
3 <command> | |
4 cat #for $q in $input_files# $q #end for# > $out_file1 | |
5 </command> | |
6 <inputs> | |
7 <param name="input_files" type="data" multiple="true" optional="false" format="fasta" label="Input text files(s)" help="One or more FASTA files" /> | |
8 </inputs> | |
9 <outputs> | |
10 <data name="out_file1" format="fasta" metadata_source="input_files"/> | |
11 </outputs> | |
12 <tests> | |
13 </tests> | |
14 <help> | |
15 | |
16 | |
17 .. class:: infomark | |
18 | |
19 Provides a list of all fasta files in your history and allows you to select and concat them all together. | |
20 | |
21 .. class:: warningmark | |
22 | |
23 Does not account for any newlines in the files | |
24 | |
25 ------ | |
26 | |
27 .. class:: infomark | |
28 | |
29 **Tool Author** | |
30 | |
31 Mando Rodriguez | |
32 </help> | |
33 </tool> | |
34 | |
35 | |
36 |