Mercurial > repos > marcel > caddsuite_linux_x86_64
diff CADDSuite/galaxyconfigs/tools/ScoreAnalyzer.xml @ 5:b7a89b15646f
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author | marcel |
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date | Tue, 12 Jul 2011 10:23:33 -0400 |
parents | ff6df146c0d5 |
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--- a/CADDSuite/galaxyconfigs/tools/ScoreAnalyzer.xml Tue Jun 28 10:37:20 2011 -0400 +++ b/CADDSuite/galaxyconfigs/tools/ScoreAnalyzer.xml Tue Jul 12 10:23:33 2011 -0400 @@ -1,6 +1,6 @@ <!--This is a configuration file for the integration of a CADDSuite tool into Galaxy (http://usegalaxy.org). This file was automatically generated using GalaxyConfigGenerator, so do not bother to make too many manual modifications.--> -<tool id="scoreanalyzer" name="ScoreAnalyzer" version="0.94"> +<tool id="scoreanalyzer" name="ScoreAnalyzer" version="0.95"> <description>generate ROC or enrichment plots</description> <command interpreter="bash"><![CDATA[../../ScoreAnalyzer #if str( $mode ) != '' and str( $mode ) != 'None' : @@ -30,18 +30,18 @@ | tail -n 5 ]]></command> <inputs> - <param name="i" label="input file" optional="false" type="data" format="mol2/sdf/drf"/> - <param name="mode" label="'roc', 'top50', 'scatter' or 'enrichment'" optional="false" type="select"> + <param name="i" optional="false" label="input file" type="data" format="mol2/sdf/drf"/> + <param name="mode" optional="false" label="'roc', 'top50', 'scatter' or 'enrichment'" type="select"> <option value="roc">roc</option> <option value="top50">top50</option> <option value="scatter">scatter</option> <option value="enrichment">enrichment</option> </param> - <param name="title" label="plot title" optional="true" area="true" type="text" size="1x15"/> - <param name="s" label="score label" optional="false" area="true" type="text" size="1x15" value="score"/> - <param name="e" label="binding-free-energy/class label name" optional="false" area="true" type="text" size="1x15" value="binding_free_energy"/> - <param name="t" label="only in case of non-binary act. data: binding-free-energy threshold; compound with values *below* this threshold will be defined as binder" optional="true" area="true" type="text" size="1x15"/> - <param name="b" label="binary experimental activity data" optional="true" type="boolean" truevalue="true" falsevalue=""/> + <param name="title" optional="true" label="Optional: plot title" area="true" type="text" size="1x15"/> + <param name="s" optional="false" label="score label" area="true" type="text" size="1x15" value="score"/> + <param name="e" optional="false" label="binding-free-energy/class label name" area="true" type="text" size="1x15" value="binding_free_energy"/> + <param name="t" optional="true" label="Optional: only in case of non-binary act. data: binding-free-energy threshold; compound with values *below* this threshold will be defined as binder" area="true" type="text" size="1x15"/> + <param name="b" optional="true" label="binary experimental activity data" type="boolean" truevalue="true" falsevalue=""/> </inputs> <outputs> <data name="o" format="png"/>