view test-data/rdock/sorted.sd @ 0:bc03dbb6eb37 draft

planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
author marpiech
date Mon, 29 Aug 2016 03:38:13 -0400
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1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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>  <Name>
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1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.93707

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.842537

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <RI>
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>  <SCORE>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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>  <Name>
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1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <SCORE.RESTR>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.75632

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.norm>
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$$$$
1NEM.B
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M  END
>  <CHROM.0>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
58.27085947

>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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1NEM.B
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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$$$$
1NEM.B
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>  <CHROM.1>
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>  <Name>
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1NEM.B
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1NEM.B
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$$$$
1NEM.B
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1NEM.B
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1NEM.B
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>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
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>  <SCORE>
-23.6857

>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-6.70087

>  <SCORE.INTER.REPUL>
1.77442

>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
-26.8953

>  <SCORE.INTER.norm>
-0.628718

>  <SCORE.INTRA>
2.58089

>  <SCORE.INTRA.DIHEDRAL>
-1.28437

>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
0.0614499

>  <SCORE.RESTR>
0

>  <SCORE.RESTR.CAVITY>
0

>  <SCORE.RESTR.norm>
0

>  <SCORE.SYSTEM>
0.139587

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.208304

>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.563944

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
-57.35016900

>  <CHROM.1>
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40.02989437,60.40353892,-177.49629073,158.70608629,-176.33281666,57.62218139
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
6.68809

>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
0.15924

>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.552622

$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
-0.543587

>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
13.1065

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
0.0345088

>  <SCORE.RESTR.CAVITY>
0.0345088

>  <SCORE.RESTR.norm>
0.000821638

>  <SCORE.SYSTEM>
0.0772462

>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
0.14902

>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
0.0127943

>  <SCORE.SYSTEM.norm>
0.0018392

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.55118

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.531384

$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <SCORE>
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>  <SCORE.INTER>
-20.4773

>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-4.06676

>  <SCORE.INTER.REPUL>
0.519747

>  <SCORE.INTER.ROT>
9

>  <SCORE.INTER.VDW>
-23.6491

>  <SCORE.INTER.norm>
-0.487556

>  <SCORE.INTRA>
-1.24167

>  <SCORE.INTRA.DIHEDRAL>
1.7403

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
-0.850434

>  <SCORE.INTRA.POLAR.0>
-1.83749

>  <SCORE.INTRA.REPUL>
0

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
0.779654

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
-0.0295636

>  <SCORE.RESTR>
0.0797458

>  <SCORE.RESTR.CAVITY>
0.0797458

>  <SCORE.RESTR.norm>
0.00189871

>  <SCORE.SYSTEM>
-0.203726

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.165358

>  <SCORE.SYSTEM.VDW>
-0.286405

>  <SCORE.SYSTEM.norm>
-0.00485061

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.520071

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
59.03650646

>  <CHROM.1>
64.83604160,40.46828800,-55.08940562,-98.65319028,177.68277328,-77.45597189
175.69143215,-70.65472172,66.81006949,-68.57085494,-174.76669428,97.28963872
-77.95345771,172.52352612,52.15481843,-57.62391902,-67.22553646,-45.86748983
-176.94749602,35.62747567,-71.74437637,-64.09503687,-0.31707611,-1.04920141
1.96077403,2.55361312,0.52186532,1.97768346

>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
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>  <SCORE>
-21.5691

>  <SCORE.INTER>
-33.2216

>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-7.13206

>  <SCORE.INTER.REPUL>
0.801131

>  <SCORE.INTER.ROT>
9

>  <SCORE.INTER.VDW>
-27.3782

>  <SCORE.INTER.norm>
-0.79099

>  <SCORE.INTRA>
11.0388

>  <SCORE.INTRA.DIHEDRAL>
-3.45486

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
0.77276

>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
0

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
10.1389

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.26283

>  <SCORE.RESTR>
0.579108

>  <SCORE.RESTR.CAVITY>
0.579108

>  <SCORE.RESTR.norm>
0.0137883

>  <SCORE.SYSTEM>
0.0345472

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.140514

>  <SCORE.SYSTEM.POLAR>
-0.00838409

>  <SCORE.SYSTEM.VDW>
-0.00720366

>  <SCORE.SYSTEM.norm>
0.000822553

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.513549

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
58.31909809

>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.276511

>  <SCORE.RESTR>
0

>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.509392

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
3.44373

>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
0.0319307

>  <SCORE.RESTR>
0

>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
0

>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.50667

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <SCORE>
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0.141247

>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
0.00080447

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.505993

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
177.78546261

>  <CHROM.1>
-67.52853627,-69.63696738,-177.64706066,-165.43634754,81.60324102,153.02276789
39.46639649,62.98960843,178.35459929,166.06782858,173.92041819,41.38848826
-61.31654868,-157.95743257,-49.11599945,62.90999059,65.19649438,-129.62931899
141.27515309,-110.63712001,105.63086277,83.27135244,0.81264433,-0.49320320
1.45117995,0.09093008,-0.36730756,-0.58240411

>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
-6.66721

>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
-0.691107

>  <SCORE.INTRA>
8.05055

>  <SCORE.INTRA.DIHEDRAL>
11.7425

>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
3.70429

>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
0.19168

>  <SCORE.RESTR>
0

>  <SCORE.RESTR.CAVITY>
0

>  <SCORE.RESTR.norm>
0

>  <SCORE.SYSTEM>
-0.167726

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.159367

>  <SCORE.SYSTEM.VDW>
-0.247409

>  <SCORE.SYSTEM.norm>
-0.00399347

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.503421

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
51.30508744

>  <CHROM.1>
175.51612384,-171.97287814,163.06579666,-88.93718337,63.78022904,-109.43169084
1.18602498,55.70748713,-79.26125900,56.53757767,53.12192143,60.72103853,-120.41142067
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.475358

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
0.673801

>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.437246

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.norm>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
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>  <CHROM.1>
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>  <Name>
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>  <SCORE.SYSTEM>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.norm>
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$$$$
1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE.INTER.VDW>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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>  <Name>
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$$$$
1NEM.B
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M  END
>  <CHROM.0>
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1NEM.B

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>  <Rbt.Receptor>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <SCORE>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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$$$$
1NEM.B
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <RI>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE.RESTR>
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>  <SCORE.SYSTEM>
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>  <SCORE.norm>
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$$$$
1NEM.B
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.1>
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1NEM.B
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1NEM.B
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M  END
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
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>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
58.39043275

>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.180921

$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
0.320052

>  <SCORE.RESTR.norm>
0.00762029

>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
0.171024

>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.15688

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
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libRbt.so/2013.1/901 2013/11/27
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>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Receptor>
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>  <SCORE>
-4.84058

>  <SCORE.INTER>
-15.0972

>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-4.29323

>  <SCORE.INTER.REPUL>
1.80693

>  <SCORE.INTER.ROT>
9

>  <SCORE.INTER.VDW>
-23.9349

>  <SCORE.INTER.norm>
-0.359457

>  <SCORE.INTRA>
9.53977

>  <SCORE.INTRA.DIHEDRAL>
7.32162

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
0.539361

>  <SCORE.INTRA.POLAR.0>
-1.83749

>  <SCORE.INTRA.REPUL>
0

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
4.04514

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.227137

>  <SCORE.RESTR>
0.819638

>  <SCORE.RESTR.CAVITY>
0.819638

>  <SCORE.RESTR.norm>
0.0195152

>  <SCORE.SYSTEM>
-0.10278

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.136826

>  <SCORE.SYSTEM.VDW>
-0.171193

>  <SCORE.SYSTEM.norm>
-0.00244714

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.115252

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
-158.67072793

>  <CHROM.1>
35.39233749,84.11315012,-168.57579221,-76.55110175,152.81294473,-128.39461688
-49.30582816,-173.45142449,72.33846365,-69.24411718,158.73510220,62.71931348
-171.75220889,-138.05795331,5.95114200,-58.06080588,168.50482237,179.53937402
-175.67290349,-53.75949982,164.90607754,150.16440332,-1.09182153,-2.00646055
2.89419120,-0.47730171,0.00784069,2.76661856

>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
new.prm

>  <SCORE>
-4.82366

>  <SCORE.INTER>
-22.6902

>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-7.32078

>  <SCORE.INTER.REPUL>
3.20455

>  <SCORE.INTER.ROT>
9

>  <SCORE.INTER.VDW>
-28.2223

>  <SCORE.INTER.norm>
-0.540244

>  <SCORE.INTRA>
16.8447

>  <SCORE.INTRA.DIHEDRAL>
11.6461

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
-1.42047

>  <SCORE.INTRA.POLAR.0>
-1.83749

>  <SCORE.INTRA.REPUL>
0

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
15.8513

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.401065

>  <SCORE.RESTR>
0.333165

>  <SCORE.RESTR.CAVITY>
0.333165

>  <SCORE.RESTR.norm>
0.00793251

>  <SCORE.SYSTEM>
0.688684

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
2.08087

>  <SCORE.SYSTEM.VDW>
-0.35175

>  <SCORE.SYSTEM.norm>
0.0163972

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.114849

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
45.56146026

>  <CHROM.1>
70.48905541,-46.15213963,146.70684464,177.86002496,67.34863679,177.63600262
-65.73770582,-174.59486166,69.02314110,-31.21399892,-154.75518318,66.03853253
84.02502119,173.21490807,108.71274910,-63.63027307,62.15329721,-47.15587534
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1.58936090,0.16049785,-0.37666596,-0.00776439

>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
-1.83749

>  <SCORE.INTRA.REPUL>
0

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
12.7278

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.457288

>  <SCORE.RESTR>
0.504177

>  <SCORE.RESTR.CAVITY>
0.504177

>  <SCORE.RESTR.norm>
0.0120042

>  <SCORE.SYSTEM>
0.396818

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
1.07972

>  <SCORE.SYSTEM.POLAR>
-0.0584503

>  <SCORE.SYSTEM.VDW>
0.0556886

>  <SCORE.SYSTEM.norm>
0.00944805

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.0949962

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
-54.81256484

>  <CHROM.1>
-178.47685089,-51.71890743,65.87529783,-153.67072351,64.11095529,-172.45488740
-80.66116055,-178.71023505,172.31381244,170.79580857,31.91088395,64.12113857
60.50499769,-146.00321432,80.64949872,-72.37114653,-166.05394020,-53.87602049
-168.67903607,-145.68608780,126.99185976,73.23503384,3.56661820,0.99401446
1.88427844,-0.54632989,-0.56079882,-0.41361352

>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
new.prm

>  <SCORE>
-3.95551

>  <SCORE.INTER>
-11.1113

>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-4.04582

>  <SCORE.INTER.REPUL>
0.505818

>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
-14.2846

>  <SCORE.INTER.norm>
-0.264555

>  <SCORE.INTRA>
6.27371

>  <SCORE.INTRA.DIHEDRAL>
4.92926

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
-1.50873

>  <SCORE.INTRA.POLAR.0>
-1.83749

>  <SCORE.INTRA.REPUL>
0.0669969

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
8.60378

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.149374

>  <SCORE.RESTR>
0.860915

>  <SCORE.RESTR.CAVITY>
0.860915

>  <SCORE.RESTR.norm>
0.020498

>  <SCORE.SYSTEM>
0.0211927

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.263095

>  <SCORE.SYSTEM.VDW>
-0.110355

>  <SCORE.SYSTEM.norm>
0.000504588

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.0941788

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
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>  <CHROM.1>
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>  <Name>
1NEM.B

>  <RI>
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>  <Rbt.Current_Directory>
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>  <Rbt.Executable>
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>  <Rbt.Library>
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>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
0.169645

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.244244

>  <SCORE.SYSTEM.VDW>
0.0475227

>  <SCORE.SYSTEM.norm>
0.00403916

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.0684716

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
 67 70  0  0  0  0  0  0  0  0999 V2000
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M  END
>  <CHROM.0>
68.53446376

>  <CHROM.1>
35.69646792,-166.04610844,140.25308405,-129.35742783,-36.31982696,-177.98873938
-75.28940221,59.51211854,171.31687546,57.72794815,172.55622736,-85.06074557
-53.28678272,-141.71297883,69.97457696,-179.03318076,161.89773052,-173.40018378
51.70836063,-81.64058945,92.07050401,177.88201334,1.58011058,0.09522399,2.25859671
0.08722045,-0.53359995,-0.06831042

>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
new.prm

>  <SCORE>
-0.563827

>  <SCORE.INTER>
-11.3424

>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-5.95681

>  <SCORE.INTER.REPUL>
0.71406

>  <SCORE.INTER.ROT>
9

>  <SCORE.INTER.VDW>
-9.05954

>  <SCORE.INTER.norm>
-0.270057

>  <SCORE.INTRA>
10.4368

>  <SCORE.INTRA.DIHEDRAL>
11.8527

>  <SCORE.INTRA.DIHEDRAL.0>
22.4324

>  <SCORE.INTRA.POLAR>
-0.737543

>  <SCORE.INTRA.POLAR.0>
-1.83749

>  <SCORE.INTRA.REPUL>
0

>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
7.01808

>  <SCORE.INTRA.VDW.0>
-7.61953

>  <SCORE.INTRA.norm>
0.248495

>  <SCORE.RESTR>
0

>  <SCORE.RESTR.CAVITY>
0

>  <SCORE.RESTR.norm>
0

>  <SCORE.SYSTEM>
0.341784

>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.476237

>  <SCORE.SYSTEM.VDW>
0.103666

>  <SCORE.SYSTEM.norm>
0.00813771

>  <SCORE.heavy>
42

>  <SCORE.norm>
-0.0134245

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
 67 70  0  0  0  0  0  0  0  0999 V2000
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M  END
>  <CHROM.0>
58.36825330

>  <CHROM.1>
62.38535959,-62.56383225,47.39681793,-108.94352051,-178.98320678,-100.09924822
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93.12628177,-135.26036603,177.54035729,-66.24233748,-58.32685498,73.70715717
103.89770338,67.97207023,-138.07122996,61.60885380,1.32214477,0.76452786
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>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
/tmp/tmpkSNM9f/job_working_directory/000/8/working/data/scripts/dock.prm

>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
0.148742

>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
-0.000884364

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
 67 70  0  0  0  0  0  0  0  0999 V2000
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M  END
>  <CHROM.0>
56.96245083

>  <CHROM.1>
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154.76075416,179.78589832,-172.88582346,-65.09184916,75.59164783,59.60991646
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>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
1

>  <SCORE.INTER.POLAR>
-5.04728

>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
-19.0459

>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
12.9976

>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
0

>  <SCORE.INTRA.VDW>
7.87025

>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
0.309466

>  <SCORE.RESTR>
0

>  <SCORE.RESTR.CAVITY>
0

>  <SCORE.RESTR.norm>
0

>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
0

>  <SCORE.SYSTEM.DIHEDRAL>
0.179825

>  <SCORE.SYSTEM.POLAR>
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>  <SCORE.SYSTEM.VDW>
0.00157639

>  <SCORE.SYSTEM.norm>
0.00102671

>  <SCORE.heavy>
42

>  <SCORE.norm>
0.0370243

$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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M  END
>  <CHROM.0>
168.80418067

>  <CHROM.1>
65.75309253,102.98169374,-138.20360075,152.96797045,-172.38617796,-130.74844933
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>  <Name>
1NEM.B

>  <RI>
3.89357e+07

>  <Rbt.Current_Directory>
/tmp/tmpkSNM9f/job_working_directory/000/8/working

>  <Rbt.Executable>
rbdock ($Id: //depot/dev/client3/rdock/2013.1/src/exe/rbdock.cxx#4 $)

>  <Rbt.Library>
libRbt.so (2013.1, Build901 2013/11/27)

>  <Rbt.Parameter_File>
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>  <Rbt.Receptor>
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>  <SCORE>
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>  <SCORE.INTER>
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>  <SCORE.INTER.CONST>
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>  <SCORE.INTER.POLAR>
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>  <SCORE.INTER.REPUL>
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>  <SCORE.INTER.ROT>
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>  <SCORE.INTER.VDW>
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>  <SCORE.INTER.norm>
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>  <SCORE.INTRA>
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>  <SCORE.INTRA.DIHEDRAL>
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>  <SCORE.INTRA.DIHEDRAL.0>
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>  <SCORE.INTRA.POLAR>
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>  <SCORE.INTRA.POLAR.0>
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>  <SCORE.INTRA.REPUL>
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>  <SCORE.INTRA.REPUL.0>
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>  <SCORE.INTRA.VDW>
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>  <SCORE.INTRA.VDW.0>
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>  <SCORE.INTRA.norm>
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>  <SCORE.RESTR>
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>  <SCORE.RESTR.CAVITY>
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>  <SCORE.RESTR.norm>
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>  <SCORE.SYSTEM>
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>  <SCORE.SYSTEM.CONST>
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>  <SCORE.SYSTEM.DIHEDRAL>
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>  <SCORE.SYSTEM.VDW>
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>  <SCORE.SYSTEM.norm>
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>  <SCORE.heavy>
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>  <SCORE.norm>
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$$$$
1NEM.B
  rDOCK(R)          3D
libRbt.so/2013.1/901 2013/11/27
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>  <SCORE.norm>
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$$$$
1NEM.B
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>  <CHROM.1>
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>  <Name>
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$$$$