Mercurial > repos > martasampaio > phagepromoter

diff test-data/output.fasta @ 22:5acc4fa8b62d draft

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author martasampaio
date Sat, 20 Apr 2019 11:07:28 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/output.fasta	Sat Apr 20 11:07:28 2019 -0400
@@ -0,0 +1,60 @@
+>NC_015264:12 phage (238..260) score=0.606
+AATAAGGAGTCACCATGACCAAC
+>NC_015264:150 phage (2996..3018) score=0.931
+TAAAAACCCTCACCAGAACAGGG
+>NC_015264:154 host (3062..3088) score=0.729
+TAAGATTACTCTTATAGTAATTATCAT
+>NC_015264:216 host (4313..4342) score=0.653
+TGAAATGAACGTGGAGACGGCTCGTAAGTT
+>NC_015264:242 phage (4835..4855) score=0.516
+ACTGGTCTCCGACGGTGTTAA
+>NC_015264:244 host (4876..4907) score=0.519
+TTGATAACGGCACAGATGATTCCTCGGAGACT
+>NC_015264:300 phage (6000..6022) score=0.981
+TAAAACCCCTCACCAAAACAGGG
+>NC_015264:412 phage (8257..8279) score=0.985
+TAAAAACCCTCACCAAAACAGGG
+>NC_015264:473 phage (9458..9480) score=0.966
+TAAAAACCCTCACCAGAACAGGG
+>NC_015264:532 phage (10632..10654) score=0.657
+CCAAACCGATCCCTAAAGGGGTC
+>NC_015264:557 phage (11141..11163) score=0.948
+TAAAAACCCTCACCAGAACAGGG
+>NC_015264:586 phage (11710..11730) score=0.557
+CTGACTTGCCGATACCCTGAA
+>NC_015264:698 phage (13956..13978) score=0.677
+CAAATACCCTCACCTAAACAGCT
+>NC_015264:826 host (16512..16542) score=0.748
+TTGACATCGAAGAGGTCTTCGTTGAGACAGT
+>NC_015264:890 phage (17793..17815) score=0.99
+TAAAACCCCTCACCTAAACAGGG
+>NC_015264:892 phage (17842..17864) score=0.7
+ACTTAAAGATCACTCTAAGGGAG
+>NC_015264:893 host (17869..17896) score=0.777
+TATGCTTAAAGAGATCCAGCACTATCTG
+>NC_015264:979 host (19585..19615) score=0.529
+TTGAGAACCTGCACGAAGCCATGATTAAGTT
+>NC_015264:1019 phage (20361..20383) score=0.993
+TAAAAACCCTCACCTAAACAGGG
+>NC_015264:1068 phage (21354..21376) score=0.99
+TAAAAACCCTCACCTAAACAGGG
+>NC_015264:1303 phage (26071..26093) score=0.953
+TAAAAACACTCACCACAACAGGG
+>NC_015264:1616 phage (32321..32341) score=0.665
+GCCGCTCACCAAGTTCCTTAC
+>NC_015264:1667 phage (33327..33349) score=0.991
+TAAAACCCCTCACCTAAACAGGG
+>NC_015264:1886 phage (37729..37751) score=0.991
+TAAAAACCCTCACCTAAAGAGGG
+>NC_015264:1932 host (38653..38681) score=0.875
+TTGACAAAGCGATCCCTGTGATCTATTAC
+>NC_015264:1936 phage (38709..38731) score=0.938
+TTAAAACCCTCACCTAAACAGGG
+>NC_015264:1937 host (38756..38783) score=1.0
+TTGACACCCTCAAAGGAGTCTGTAGAAT
+>NC_015264:1945 host (38917..38944) score=0.997
+TTGACACTGAGTAACAACGCTGTAGAAT
+>NC_015264:1958 host (39147..39178) score=0.697
+TAGACATGCACGTCACTGGTCTTGAATATGAT
+>NC_015264:2011 phage (40226..40248) score=0.63
+AATAAGGAGTCACCATGACCAAC