Mercurial > repos > matt-shirley > ncbi_sra_toolkit
comparison fastq_dump.xml @ 25:393a04ec0fa9
Update tool requirement versions.
author | Matt Shirley <mdshw5@gmail.com> |
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date | Mon, 30 Mar 2015 21:57:40 -0400 |
parents | eb55ff614fed |
children | 8be4f23d1018 |
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24:22d9fe442c50 | 25:393a04ec0fa9 |
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110 </outputs> | 110 </outputs> |
111 <stdio> | 111 <stdio> |
112 <exit_code range="127" level="fatal" description="Could not locate fastq-dump binary"/> | 112 <exit_code range="127" level="fatal" description="Could not locate fastq-dump binary"/> |
113 </stdio> | 113 </stdio> |
114 <requirements> | 114 <requirements> |
115 <requirement type="package" version="2.3.4-2">sra_toolkit</requirement> | 115 <requirement type="package" version="2.4.5">sra_toolkit</requirement> |
116 </requirements> | 116 </requirements> |
117 <help> | 117 <help> |
118 This tool extracts reads from SRA archives using fastq-dump. | 118 This tool extracts reads from SRA archives using fastq-dump. |
119 Browse the NCBI SRA for SRR accessions at http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=studies. | 119 Browse the NCBI SRA for SRR accessions at http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=studies. |
120 The fastq-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software. | 120 The fastq-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software. |