Mercurial > repos > matteoc > agame_custom_tools
comparison pfam_search/prots @ 0:68a3648c7d91 draft default tip
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| author | matteoc |
|---|---|
| date | Thu, 22 Dec 2016 04:45:31 -0500 |
| parents | |
| children |
comparison
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| -1:000000000000 | 0:68a3648c7d91 |
|---|---|
| 1 >PROKKA_00001 Mercuric resistance operon regulatory protein | |
| 2 MENNLENLTIGVFAKAAGVNVETIRFYQRKGLLREPDKPYGSIRRYGEADVVRVKFVKSA | |
| 3 QRLGFSLDEIAELLRLDDGTHCEEASSLAEHKLKDVREKMADLARMETVLSELVCACHAR | |
| 4 KGNVSCPLIASLQGEAGLARSAMP* | |
| 5 >PROKKA_00002 MerT mercuric transport protein | |
| 6 MSEPQNGRGALFAGGLAAILASTCCLGPLVLVALGFSGAWIGNLTVLEPYRPLFIGAALV | |
| 7 ALFFAWKRIYRPVQACKPGEVCAIPQVRATYKLIFWIVAVLVLVALGFPYVVPFFY* | |
| 8 >PROKKA_00003 Mercuric transport protein periplasmic component precursor | |
| 9 MKKLFASLALAAAVAPVWAATQTVTLAVPGMTCAACPITVKKALSKVEGVSKVDVGFEKR | |
| 10 EAVVTFDDTKASVQKLTKATADAGYPSSVKQ* | |
| 11 >PROKKA_00004 Mercuric resistance protein MerC | |
| 12 MGLMTRIADKTGALGSVVSAMGCAACFPALASFGAAIGLGFLSQYEGLFISRLLPLFAAL | |
| 13 AFLANALGWFSHRQWLRSLLGMIGPAIVFAATVWLLGNWWTANLMYVGLALMIGVSIWDF | |
| 14 VSPAHRRCGPDGCELPAKRL* | |
| 15 >PROKKA_00005 Mercuric reductase | |
| 16 MSTLKITGMTCDSCAVHVKDALEKVPGVQSADVSYAKGSAKLAIEVGTSPDALTAAVAGL | |
| 17 GYRATLADAPSVSTPGGLLDKMRDLLGRNDKTGSSGALHIAVIGSGGAAMAAALKAVEQG | |
| 18 ARVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATTPTIQRTALLAQ | |
| 19 QQARVDELRHAKYEGILEGNPAITVLHGSARFKDNRNLIVQLNDGGERVVAFDRCLIATG | |
| 20 ASPAVPPIPGLKDTPYWTSTEALVSETIPKRLAVIGSSVVALELAQAFARLGAKVTILAR | |
| 21 STLFFREDPAIGEAVTAAFRMEGIEVREHTQASQVAYINGEGDGEFVLTTAHGELRADKL | |
| 22 LVATGRAPNTRKLALDATGVTLTPQGAIVIDPGMRTSVEHIYAAGDCTDQPQFVYVAAAA | |
| 23 GTRAAINMTGGDAALNLTAMPAVVFTDPQVATVGYSEAEAHHDGIKTDSRTLTLDNVPRA | |
| 24 LANFDTRGFIKLVVEEGSGRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLT | |
| 25 MVEGLKLAAQTFNKDVKQLSCCAG* | |
| 26 >PROKKA_00006 zinc-responsive transcriptional regulator | |
| 27 MSAYTVSQLAHNAGVSVHIVRDYLVRGLLRPVACTTGGYGVFDDAALQRLCFVRAAFEAG | |
| 28 IGLDALARLCRALDAADGAQAAAQLAVLRQLVERRRAALAHLDAQLASMPAERAHEEALP | |
| 29 * | |
| 30 >PROKKA_00007 MerE protein | |
| 31 VNAPDKLPPETRQPVSGYLWGALAVLTCPCHLPILAAVLAGTTAGAFLGEHWGVAALALT | |
| 32 GLFVLAVTRLLRAFRGGS* | |
| 33 >PROKKA_00008 Phytochrome-like protein cph2 | |
| 34 MTSSQPAGWTAAELAQAAARGQLDLHYQPLVDLRDHRIAGAEALMRWRHPRLGLLPPGQF | |
| 35 LPLAESFGLMPEIGAWVLGEACRQMHKWQGPAWQPFRLAINVSASQVGPTFDDEVKRVLA | |
| 36 DMALPAELLEIELTESVAFGNPALFASFDALRAIGVRFAADDFGTGYSCLQHLKCCPITT | |
| 37 LKIDQSFVARLPDDARDQTIVRAVIQLAHGLGMDVIFRRRLHQLIGRNGCCAASS* | |
| 38 >PROKKA_00009 Transposon Tn7 transposition protein TnsB | |
| 39 MATDTPRIPEQGVATLPDEAWERARRRAEIISPLAQSETVGHEAADMAAQALGLSRRQVY | |
| 40 VLIRRARQGSGLVTDLVPGQSGGGKGKGRLPEPVERVIHELLQKRFLTKQKRSLAAFHRE | |
| 41 VTQVCKAQKLRVPARNTVALRIASLDPRKVIRRREGQDAARDLQGVGGEPPAVTAPLEQV | |
| 42 QIDHTVIDLIVVDDRDRQPIGRPYLTLAIDVFTRCVLGMVVTLEAPSAVSVGLCLVHVAC | |
| 43 DKRPWLEGLNVEMDWQMSGKPLLLYLDNAAEFKSEALRRGCEQHGIRLDYRPLGQPHYGG | |
| 44 IVERIIGTAMQMIHDELPGTTFSNPDQRGDYDSENKAALTLRELERWLTLAVGTYHGSVH | |
| 45 NGLLQPPAARWAEAVARVGVPAVVTRATSFLVDFLPILRRTLTRTGFVIDHIHYYADGHC | |
| 46 CK* | |
| 47 >PROKKA_00010 Integrase core domain protein | |
| 48 MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEK | |
| 49 RLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLG | |
| 50 KILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLK | |
| 51 RIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM* | |
| 52 >PROKKA_00011 DNA-binding transcriptional regulator LysR | |
| 53 MKLRHLDIFYAVMTCGSLTRAAEVLHISQPAASKALKHAEH* | |
| 54 >PROKKA_00012 hypothetical protein | |
| 55 MPSRFLTPYIPLVNLFSLHVYELILVTTKPKFEL* | |
| 56 >PROKKA_00013 Sodium/glutamate symport carrier protein | |
| 57 MILDASYTLLVACIALLIGMFVVKFTPFLQKNHIPEAVVGGFIVAIVLLIIDKTSGYSFT | |
| 58 FDASLQSLLMLTFFSSIGLSSDFSRLIKGGKPLVLLTIAVTILIAIQNTVGMSMAVMMNE | |
| 59 SPFIGLIAGSITLTGGHGNAGAWGPILADKYGVTGAVELAMACATLGLVLGGLVGGPVAR | |
| 60 HLLKKVSIPKTTEQERDTIVEAFEQPSVKRKINANNVIETISMLIICIVVGGYISALFKD | |
| 61 TFLQLPTFVWCLFVGIIIRNTLTHVFKHEVFEPTVDVLGSVALSLFLAMALMSLKFGQLA | |
| 62 SMAGPVLIIIAVQTVVMVLFACFVTFKMMGKDYDAVVISAGHCGFGMGATPTAIANMQTV | |
| 63 TKAFGPSHKAFLVVPMVGAFIVDISNSILIKIFIEIGTYFT* | |
| 64 >PROKKA_00014 Antibiotic biosynthesis monooxygenase | |
| 65 MIAVIFEVQIQPDQQTRYLTLAEELRPLLSHVAGFISIERFQSLATEGKMLSLSWWENEY | |
| 66 AVLQWKNHVLHAKAQQEGRESIFDFYKISIAHITREYSFKKDKDNV* | |
| 67 >PROKKA_00015 hypothetical protein | |
| 68 MFDVHVVLDNQIGQLALLGKTLGNKGIGLEGGGIFTVGDECHAHFLVEQGKEAKIALEQA | |
| 69 GLLVLAIRTPLIRKLKQEKPGELGEIARVLAENNINILVQYSDHANQLILITDNDSMAAS | |
| 70 VTLPWAIK* | |
| 71 >PROKKA_00016 Helix-turn-helix domain protein | |
| 72 MSDISRVKILSALMDGRAWTATELSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFR | |
| 73 LAGKDIAELMESMMGISLNHGVHARVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWI | |
| 74 TENGSMITLSGIQYFHEMGIDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKG | |
| 75 WLTRHLGYREVTITEKGYAAFKTHFHI* | |
| 76 >PROKKA_00017 Tetracycline repressor protein class B from transposon Tn10 | |
| 77 MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAIEML | |
| 78 DRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGTRPTEKQYETLENQLAFL | |
| 79 CQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPTTDSMPPLLRQAIELFDHQ | |
| 80 GAEPAFLFGLELIICGLEKQLKCESGS* |