diff pfamScan/Bio/Pfam/HMM/HMMMatch.pm @ 0:68a3648c7d91 draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/pfamScan/Bio/Pfam/HMM/HMMMatch.pm	Thu Dec 22 04:45:31 2016 -0500
@@ -0,0 +1,62 @@
+
+package Bio::Pfam::HMM::HMMMatch;
+
+use strict;
+use warnings;
+
+use Moose;
+use Moose::Util::TypeConstraints;
+
+
+subtype 'evalue'
+  => as Str
+  => where { $_ =~ m/^(\d+(\.\d+){0,1}e[+|-]\d+|\d+\.\d+|\d+)$/ }
+  => message { "$_ does not look like an evalue" };
+
+has 'evalue' => (
+  isa       => 'evalue', 
+  is        => 'rw',
+  required  => 1
+);
+
+has 'bits' => (
+  isa => 'Str',
+  is  => 'rw',
+  required => 1
+);
+
+has 'name' => (
+  isa => 'Str',
+  is  => 'rw',
+  required => 1
+);
+
+has bias => (
+  isa => 'Num',
+  is  => 'rw'
+);
+
+  __PACKAGE__->meta->make_immutable;
+
+=head1 COPYRIGHT
+
+Copyright (c) 2007: Genome Research Ltd.
+
+Authors: Rob Finn ([e-mail]), John Tate ([e-mail])
+
+This is free software; you can redistribute it and/or modify it under
+the terms of the GNU General Public License as published by the Free Software
+Foundation; either version 2 of the License, or (at your option) any later
+version.
+
+This program is distributed in the hope that it will be useful, but WITHOUT
+ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
+details.
+
+You should have received a copy of the GNU General Public License along with
+this program. If not, see <http://www.gnu.org/licenses/>.
+
+=cut
+
+1;