Mercurial > repos > mb2013 > nepenthes_3dpca
comparison ReConstructor.xml @ 12:f69fc89bb392 draft
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author | mb2013 |
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date | Tue, 20 May 2014 03:27:42 -0400 |
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11:064592f816c6 | 12:f69fc89bb392 |
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1 <tool id="ReConstructor" name="ReConstructor"> | |
2 <description>Reconstruct 3D object</description> | |
3 <command interpreter="python"> | |
4 ReConstructor.py $input $output1 $side $box_x $box_y $box_z $std_factor $colour $x_1 $x_2 | |
5 $y_1 $y_2 $z_1 $z_2 $output2 $output3 | |
6 </command> | |
7 <inputs> | |
8 <param name="input" type="data" label="Rotated .ply file" /> | |
9 <param name="side" type="select" label="left side is correct"> | |
10 <option value="0" selected="true">Yes</option> | |
11 <option value="1" >No</option> | |
12 </param> | |
13 <param name="box_x" size = "2" type = "integer" value = "3" label="sections x" /> | |
14 <param name="box_y" size = "2" type = "integer" value = "5" label="sections y" /> | |
15 <param name="box_z" size = "2" type = "integer" value = "4" label="sections z" /> | |
16 <param name="std_factor" size = "2" type = "integer" value = "1" label="standard deviation factor" /> | |
17 <param name="x_1" size = "8" type = "text" value = "standard" label="minimum x" /> | |
18 <param name="x_2" size = "8" type = "text" value = "standard" label="maximum x" /> | |
19 <param name="y_1" size = "8" type = "text" value = "standard" label="minimum y" /> | |
20 <param name="y_2" size = "8" type = "text" value = "standard" label="maximum y" /> | |
21 <param name="z_1" size = "8" type = "text" value = "standard" label="minimum z" /> | |
22 <param name="z_2" size = "8" type = "text" value = "standard" label="maximum z" /> | |
23 <param name="colour" type="select" label="colour of new surface"> | |
24 <option value="0" selected="true">Pink</option> | |
25 <option value="1" >Light Blue</option> | |
26 <option value="2" >Green</option> | |
27 <option value="3" >Red</option> | |
28 </param> | |
29 </inputs> | |
30 | |
31 <outputs> | |
32 <data name="output1" type = "data" format = "ply" label="Reconstruct ${on_string}" /> | |
33 <data name="output2" type = "data" format = "txt" label="log ${on_string}" /> | |
34 <data name="output3" type = "data" format = "txt" label="histogram log ${on_string}" /> | |
35 </outputs> | |
36 <help> | |
37 **Function** | |
38 | |
39 Reconstruct object based on symmetry | |
40 | |
41 | |
42 **Input file** | |
43 | |
44 rotated .ply file with colorcode | |
45 | |
46 | |
47 | |
48 | |
49 </help> | |
50 </tool> |