Mercurial > repos > mbernt > longorf
diff test-data/test_input.fasta @ 0:ec898924d8c7 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/blob/master/tools/longorf/ commit 8e118a4d24047e2c62912b962e854f789d6ff559
author | mbernt |
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date | Wed, 20 Jun 2018 11:02:06 -0400 |
parents | |
children | 1c4b24e9bb16 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_input.fasta Wed Jun 20 11:02:06 2018 -0400 @@ -0,0 +1,127 @@ +>14520830-14521117(-)_1 [2 - 37] +KPLENISASREF +>14520830-14521117(-)_2 [3 - 47] +SPWRIFQPAENFDLQ +>14520830-14521117(-)_3 [41 - 94] +LAVGFGLIFLRSGWMPCL +>14520830-14521117(-)_4 [63 - 152] +FSYDLGGCLACDSCSSYSPNEGQCPARKLE +>14520830-14521117(-)_5 [146 - 175] +VGMMDLCSET +>14520830-14521117(-)_6 [156 - 200] +WTCVQRLNRTNKQNK +>14520830-14521117(-)_7 [1 - 240] +KAPGEYFSQQRILTCSRIWFDFPTIWVDALPVTVAVPIRQMKGSAPHVSWNDGPVFRDLT +EPTSKTSENRKKEEDTGINS +>14520830-14521117(-)_8 [179 - 325] +QNQQAKQVRTGKRKRTLESILESCTTWFFFHSKFRGTKPLENISASREF +>14520830-14521117(-)_9 [204 - 335] +EQEKGRGHWNQFLRVALLGFSSIPSFVGQSPWRIFQPAENFDLQ +>14520830-14521117(-)_10 [329 - 382] +LAVGFGLIFLRSGWMPCL +>14520830-14521117(-)_11 [351 - 440] +FSYDLGGCLACDSCSSYSPNEGQCPARKLE +>14520830-14521117(-)_12 [434 - 463] +VGMMDLCSET +>14520830-14521117(-)_13 [444 - 488] +WTCVQRLNRTNKQNK +>14520830-14521117(-)_14 [244 - 528] +ELHYLVFLPFQVSWDKAPGEYFSQQRILTCSRIWFDFPTIWVDALPVTVAVPIRQMKGSA +PHVSWNDGPVFRDLTEPTSKTSENRKKEEDTGINS +>14520830-14521117(-)_15 [467 - 574] +QNQQAKQVRTGKRKRTLESILESCTTWFFFHSKFRG +>14520830-14521117(-)_16 [492 - 575] +EQEKGRGHWNQFLRVALLGFSSIPSFVG +>14520830-14521117(-)_17 [532 - 576] +ELHYLVFLPFQVSWD +>14520830-14521117(-)_18 [575 - 543] (REVERSE SENSE) +SHETWNGRKTK +>14520830-14521117(-)_19 [574 - 524] (REVERSE SENSE) +PTKLGMEEKPSSATLKN +>14520830-14521117(-)_20 [576 - 466] (REVERSE SENSE) +VPRNLEWKKNQVVQLSRIDSSVLFLFPVLTCFACWFC +>14520830-14521117(-)_21 [520 - 458] (REVERSE SENSE) +FQCPLPFSCSHLFCLLVLLSL +>14520830-14521117(-)_22 [454 - 401] (REVERSE SENSE) +TQVHHSNLRAGHCPSFGE +>14520830-14521117(-)_23 [397 - 359] (REVERSE SENSE) +ELQLSQARHPPRS +>14520830-14521117(-)_24 [355 - 311] (REVERSE SENSE) +ENQTKSYCKSKFSAG +>14520830-14521117(-)_25 [539 - 255] (REVERSE SENSE) +CNSQELIPVSSSFFLFSLVLLVGSVKSLNTGPSFQLTCGALPFIWRIGTATVTGKASTQI +VGKSNQILLQVKILCWLKYSPGALSHETWNGRKTK +>14520830-14521117(-)_26 [307 - 236] (REVERSE SENSE) +NILQGLCPTKLGMEEKPSSATLKN +>14520830-14521117(-)_27 [462 - 178] (REVERSE SENSE) +VSEHRSIIPTYVRGTALHLANRNCNCHRQGIHPDRRKIKPNPTASQNSLLAEIFSRGFVP +RNLEWKKNQVVQLSRIDSSVLFLFPVLTCFACWFC +>14520830-14521117(-)_28 [232 - 170] (REVERSE SENSE) +FQCPLPFSCSHLFCLLVLLSL +>14520830-14521117(-)_29 [166 - 113] (REVERSE SENSE) +TQVHHSNLRAGHCPSFGE +>14520830-14521117(-)_30 [109 - 71] (REVERSE SENSE) +ELQLSQARHPPRS +>14520830-14521117(-)_31 [67 - 23] (REVERSE SENSE) +ENQTKSYCKSKFSAG +>14520830-14521117(-)_32 [251 - 3] (REVERSE SENSE) +CNSQELIPVSSSFFLFSLVLLVGSVKSLNTGPSFQLTCGALPFIWRIGTATVTGKASTQI +VGKSNQILLQVKILCWLKYSPGA +>14520830-14521117(-)_33 [174 - 1] (REVERSE SENSE) +VSEHRSIIPTYVRGTALHLANRNCNCHRQGIHPDRRKIKPNPTASQNSLLAEIFSRGF +>103089310-103089560(-)_1 [2 - 37] +GTSEKFLKILLS +>103089310-103089560(-)_2 [24 - 92] +RFYYHRYLFWFCVSVLSADGPKL +>103089310-103089560(-)_3 [13 - 117] +KVSEDFIIIDTCFGFVYLYSLQMVQNCNGVCIRRK +>103089310-103089560(-)_4 [138 - 167] +TACIWLHCGL +>103089310-103089560(-)_5 [180 - 260] +NHPYVSVSGYTRKRKESQSGTKSGRYV +>103089310-103089560(-)_6 [41 - 271] +ILVLVLCICTLCRWSKIVMESVLEENKGKIRLNCMYMAPLWLVTLLKSSVCQCIWIHEEK +ERVSEWNKEWEVRLKSF +>103089310-103089560(-)_7 [127 - 288] +NQAELHVYGSTVACDTFKIIRMSVYLDTRGKGKSLRVEQRVGGTSEKFLKILLS +>103089310-103089560(-)_8 [275 - 343] +RFYYHRYLFWFCVSVLSADGPKL +>103089310-103089560(-)_9 [264 - 368] +KVSEDFIIIDTCFGFVYLYSLQMVQNCNGVCIRRK +>103089310-103089560(-)_10 [389 - 418] +TACIWLHCGL +>103089310-103089560(-)_11 [378 - 500] +NQAELHVYGSTVACDTFKIIRMSVYLDTRGKGKSLRVEQRV +>103089310-103089560(-)_12 [292 - 501] +ILVLVLCICTLCRWSKIVMESVLEENKGKIRLNCMYMAPLWLVTLLKSSVCQCIWIHEEK +ERVSEWNKEW +>103089310-103089560(-)_13 [431 - 502] +NHPYVSVSGYTRKRKESQSGTKSG +>103089310-103089560(-)_14 [500 - 447] (REVERSE SENSE) +HSLFHSETLSFSSCIQIH +>103089310-103089560(-)_15 [480 - 436] (REVERSE SENSE) +DSFLFLVYPDTLTYG +>103089310-103089560(-)_16 [502 - 383] (REVERSE SENSE) +PTLCSTLRLFPFPRVSRYTDIRMILKVSQATVEPYTCSSA +>103089310-103089560(-)_17 [426 - 361] (REVERSE SENSE) +KCHKPQWSHIHAVQPDFTLIFF +>103089310-103089560(-)_18 [357 - 289] (REVERSE SENSE) +YRLHYNFGPSAESTDTQNQNKYL +>103089310-103089560(-)_19 [379 - 233] (REVERSE SENSE) +FYPYFLLIQTPLQFWTICREYRYTKPKQVSMIIKSSETFQTYLPLFVPL +>103089310-103089560(-)_20 [279 - 196] (REVERSE SENSE) +NLQKLFRRTSHSLFHSETLSFSSCIQIH +>103089310-103089560(-)_21 [229 - 185] (REVERSE SENSE) +DSFLFLVYPDTLTYG +>103089310-103089560(-)_22 [443 - 132] (REVERSE SENSE) +HTDDFKSVTSHSGAIYMQFSLILPLFSSNTDSITILDHLQRVQIHKTKTSIYDNKIFRNF +SDVPPTLCSTLRLFPFPRVSRYTDIRMILKVSQATVEPYTCSSA +>103089310-103089560(-)_23 [175 - 110] (REVERSE SENSE) +KCHKPQWSHIHAVQPDFTLIFF +>103089310-103089560(-)_24 [106 - 38] (REVERSE SENSE) +YRLHYNFGPSAESTDTQNQNKYL +>103089310-103089560(-)_25 [128 - 3] (REVERSE SENSE) +FYPYFLLIQTPLQFWTICREYRYTKPKQVSMIIKSSETFQTY +>103089310-103089560(-)_26 [192 - 1] (REVERSE SENSE) +HTDDFKSVTSHSGAIYMQFSLILPLFSSNTDSITILDHLQRVQIHKTKTSIYDNKIFRNF +SDVP