Mercurial > repos > mbernt > maxbin2
comparison test-data/3/out.idba.out @ 0:35aa0df55a62 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/maxbin2 commit 8e118a4d24047e2c62912b962e854f789d6ff559-dirty
| author | mbernt |
|---|---|
| date | Thu, 28 Jun 2018 08:49:29 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:35aa0df55a62 |
|---|---|
| 1 number of threads 1 | |
| 2 reads 21484 | |
| 3 long reads 0 | |
| 4 extra reads 0 | |
| 5 read_length 93 | |
| 6 kmer 60 | |
| 7 kmers 189823 188895 | |
| 8 merge bubble 2 | |
| 9 contigs: 292 n50: 586 max: 2560 mean: 547 total length: 159906 n80: 365 | |
| 10 aligned 14823 reads | |
| 11 confirmed bases: 135234 correct reads: 11116 bases: 300 | |
| 12 kmer 20 | |
| 13 kmers 228328 228212 | |
| 14 merge bubble 14 | |
| 15 contigs: 233 n50: 3245 max: 7554 mean: 965 total length: 224992 n80: 896 | |
| 16 aligned 19152 reads | |
| 17 confirmed bases: 181101 correct reads: 12296 bases: 35 | |
| 18 distance mean 1000 sd 0 | |
| 19 seed contigs 146 local contigs 466 | |
| 20 kmer 40 | |
| 21 kmers 227514 227453 | |
| 22 merge bubble 6 | |
| 23 contigs: 153 n50: 3744 max: 10866 mean: 1506 total length: 230550 n80: 1749 | |
| 24 aligned 19655 reads | |
| 25 confirmed bases: 186149 correct reads: 12597 bases: 5 | |
| 26 distance mean 999.98 sd 0.1398 | |
| 27 seed contigs 119 local contigs 306 | |
| 28 kmer 60 | |
| 29 kmers 225678 225589 | |
| 30 merge bubble 3 | |
| 31 contigs: 121 n50: 3826 max: 10866 mean: 1897 total length: 229604 n80: 1976 | |
| 32 aligned 19732 reads | |
| 33 confirmed bases: 186576 correct reads: 12645 bases: 0 | |
| 34 distance mean 999.98 sd 0.138491 | |
| 35 seed contigs 114 local contigs 242 | |
| 36 kmer 80 | |
| 37 kmers 222596 222502 | |
| 38 merge bubble 2 | |
| 39 contigs: 109 n50: 3826 max: 10866 mean: 2099 total length: 228800 n80: 2256 | |
| 40 aligned 19712 reads | |
| 41 confirmed bases: 186604 correct reads: 12655 bases: 0 | |
| 42 distance mean 999.981 sd 0.138243 | |
| 43 seed contigs 108 local contigs 218 | |
| 44 kmer 100 | |
| 45 kmers 219702 219610 | |
| 46 merge bubble 0 | |
| 47 contigs: 106 n50: 3826 max: 10866 mean: 2152 total length: 228179 n80: 2034 | |
| 48 reads 21484 | |
| 49 aligned 19623 reads | |
| 50 distance mean 999.975 sd 0.155413 | |
| 51 expected coverage 0.0899218 | |
| 52 edgs 60 | |
| 53 contigs: 64 n50: 4891 max: 11700 mean: 3610 total length: 231059 n80: 3499 |