diff test-data/3/out.idba.out @ 0:35aa0df55a62 draft

planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/maxbin2 commit 8e118a4d24047e2c62912b962e854f789d6ff559-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/3/out.idba.out	Thu Jun 28 08:49:29 2018 -0400
@@ -0,0 +1,53 @@
+number of threads 1
+reads 21484
+long reads 0
+extra reads 0
+read_length 93
+kmer 60
+kmers 189823 188895
+merge bubble 2
+contigs: 292 n50: 586 max: 2560 mean: 547 total length: 159906 n80: 365
+aligned 14823 reads
+confirmed bases: 135234 correct reads: 11116 bases: 300
+kmer 20
+kmers 228328 228212
+merge bubble 14
+contigs: 233 n50: 3245 max: 7554 mean: 965 total length: 224992 n80: 896
+aligned 19152 reads
+confirmed bases: 181101 correct reads: 12296 bases: 35
+distance mean 1000 sd 0
+seed contigs 146 local contigs 466
+kmer 40
+kmers 227514 227453
+merge bubble 6
+contigs: 153 n50: 3744 max: 10866 mean: 1506 total length: 230550 n80: 1749
+aligned 19655 reads
+confirmed bases: 186149 correct reads: 12597 bases: 5
+distance mean 999.98 sd 0.1398
+seed contigs 119 local contigs 306
+kmer 60
+kmers 225678 225589
+merge bubble 3
+contigs: 121 n50: 3826 max: 10866 mean: 1897 total length: 229604 n80: 1976
+aligned 19732 reads
+confirmed bases: 186576 correct reads: 12645 bases: 0
+distance mean 999.98 sd 0.138491
+seed contigs 114 local contigs 242
+kmer 80
+kmers 222596 222502
+merge bubble 2
+contigs: 109 n50: 3826 max: 10866 mean: 2099 total length: 228800 n80: 2256
+aligned 19712 reads
+confirmed bases: 186604 correct reads: 12655 bases: 0
+distance mean 999.981 sd 0.138243
+seed contigs 108 local contigs 218
+kmer 100
+kmers 219702 219610
+merge bubble 0
+contigs: 106 n50: 3826 max: 10866 mean: 2152 total length: 228179 n80: 2034
+reads 21484
+aligned 19623 reads
+distance mean 999.975 sd 0.155413
+expected coverage 0.0899218
+edgs 60
+contigs: 64 n50: 4891 max: 11700 mean: 3610 total length: 231059 n80: 3499