Mercurial > repos > mbernt > maxbin2

diff maxbin2.xml @ 8:9da9706f7ca9 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/maxbin2/ commit a1af4fcdd71f8a85f03db880bcc22751acd5e722
author iuc
date Sun, 14 Jan 2024 17:20:43 +0000
parents 28a0b1446d2b
children
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--- a/maxbin2.xml	Wed Dec 20 20:27:57 2023 +0000
+++ b/maxbin2.xml	Sun Jan 14 17:20:43 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="maxbin2" name="MaxBin2" version="@MAXBIN_VERSION@+galaxy5">
+<tool id="maxbin2" name="MaxBin2" version="@MAXBIN_VERSION@+galaxy6">
     <description>clusters metagenomic contigs into bins</description>
     <macros>
         <token name="@MAXBIN_VERSION@">2.2.7</token>
@@ -41,7 +41,7 @@
     #else
         #for $i, $r in enumerate($assembly.inputs.reads)
             #if $r
-                #set $identifier = re.sub('[^\s\w\-\\.]', '_', str($r.element_identifier))
+                #set $identifier = re.sub('[^\w\-\\.]', '_', str($r.element_identifier))
                 #set $newid = $identifier +  '_'  + str($i)
                 #if $r.ext.endswith(".gz")
 gunzip -c '$r' > '$newid' &&