view test-data/3/out.idba.out @ 1:864279a0d64b draft

planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/maxbin2 commit c003bb1aa5c8c42650b27516f0951e0d67f11857-dirty

number of threads 1
reads 21484
long reads 0
extra reads 0
read_length 93
kmer 60
kmers 189823 188895
merge bubble 2
contigs: 292 n50: 586 max: 2560 mean: 547 total length: 159906 n80: 365
aligned 14823 reads
confirmed bases: 135234 correct reads: 11116 bases: 300
kmer 20
kmers 228328 228212
merge bubble 14
contigs: 233 n50: 3245 max: 7554 mean: 965 total length: 224992 n80: 896
aligned 19152 reads
confirmed bases: 181101 correct reads: 12296 bases: 35
distance mean 1000 sd 0
seed contigs 146 local contigs 466
kmer 40
kmers 227514 227453
merge bubble 6
contigs: 153 n50: 3744 max: 10866 mean: 1506 total length: 230550 n80: 1749
aligned 19655 reads
confirmed bases: 186149 correct reads: 12597 bases: 5
distance mean 999.98 sd 0.1398
seed contigs 119 local contigs 306
kmer 60
kmers 225678 225589
merge bubble 3
contigs: 121 n50: 3826 max: 10866 mean: 1897 total length: 229604 n80: 1976
aligned 19732 reads
confirmed bases: 186576 correct reads: 12645 bases: 0
distance mean 999.98 sd 0.138491
seed contigs 114 local contigs 242
kmer 80
kmers 222596 222502
merge bubble 2
contigs: 109 n50: 3826 max: 10866 mean: 2099 total length: 228800 n80: 2256
aligned 19712 reads
confirmed bases: 186604 correct reads: 12655 bases: 0
distance mean 999.981 sd 0.138243
seed contigs 108 local contigs 218
kmer 100
kmers 219702 219610
merge bubble 0
contigs: 106 n50: 3826 max: 10866 mean: 2152 total length: 228179 n80: 2034
reads 21484
aligned 19623 reads
distance mean 999.975 sd 0.155413
expected coverage 0.0899218
edgs 60
contigs: 64 n50: 4891 max: 11700 mean: 3610 total length: 231059 n80: 3499