Mercurial > repos > mcharles > rapsodyn

changeset 0:029c7abe6ff9 draft

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Uploaded
author mcharles
date Mon, 16 Jun 2014 05:57:43 -0400
parents
children 2e27d068d9b0
files filtersamunique.xml
diffstat 1 files changed, 18 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/filtersamunique.xml	Mon Jun 16 05:57:43 2014 -0400
@@ -0,0 +1,18 @@
+<tool id="filtersamunique" name="filtersamunique" version="0.01">
+<description>Filter SAM file for uniquelly match reads</description>
+<command interpreter="perl">
+    filtersamunique.pl $input_sam_file > $output_file 
+</command>
+<inputs>
+<param name="input_sam_file"  type="data" format="sam" label="Select a suitable input SAM file from your history"/>
+</inputs>
+<outputs>
+ <data name="output_file" format="sam" label="${tool.name} on ${on_string}"/>
+</outputs>
+
+<help>
+
+
+
+</help>
+</tool>