comparison rapsodyn/PileupVariant.xml @ 7:3f7b0788a1c4 draft

Uploaded

6:1776b8ddd87e

<tool id="PileupVariant" name="PileupVariant" version="0.01">
<description>Keep only mpileup line with variant</description>
<command interpreter="perl">
    PileupVariant.pl $input_file > $output_file 
</command>
<inputs>
<param name="input_file"  type="data" format="pileup" label="Select a suitable input file from your history"/>
</inputs>
<outputs>
 <data name="output_file" format="pileup" label="${tool.name} on ${on_string}"/>
</outputs>

<help>

7:3f7b0788a1c4

<tool id="PileupVariant" name="PileupVariant" version="1.01">
<description>Keep only mpileup line with variant</description>
<command interpreter="perl">
    PileupVariant.pl -input_pileup_file $input_pileup_file -log_file $log_file > $output_pileup_file 
</command>
<inputs>
	<param name="input_pileup_file"  type="data" format="pileup" label="Select a suitable input file from your history"/>
</inputs>
<outputs>
	<data name="output_pileup_file" format="pileup" label="${tool.name} on ${on_string}"/>
	<data name="log_file" format="txt" label="${tool.name} LOG on ${on_string}"/>	
</outputs>

<help>