view rapsodyn/MergeMultiFile.xml @ 10:0a6c1cfe4dc8 draft

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<tool id="MergeMultiFile" name="MergeMultiFile" version="1.00">
<description>Merge multiple files</description>
<command interpreter="perl">
    MergeMultiFile.pl $input_files > $output_file 
</command>
<inputs>
<param name="out_format" type="select" label="Format">
	<option value="pileup">pileup</option>
	<option value="fastq">fastq</option>
	<option value="fastqsanger">fastqsanger</option>
	<option value="sam">sam</option>
	<option value="fasta">fasta</option>
	<option value="txt">txt</option>
</param>
<param name="input_files"  type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" multiple="true" label="Select suitable files from your history"/>
</inputs>
<outputs>
<data name="output_file" format="txt" label="MERGE on ${on_string}">
	<change_format>
		<when input="out_format" value="pileup" format="pileup" />
		<when input="out_format" value="fastq" format="fastq" />
		<when input="out_format" value="fastqsanger" format="fastqsanger" />
		<when input="out_format" value="sam" format="sam" />
		<when input="out_format" value="fasta" format="fasta" />
	</change_format>
</data>
</outputs>

<help>



</help>
</tool>