Mercurial > repos > mcharles > rapsosnp
view rapsodyn/SplitFile2x.xml @ 0:442a7c88b886 draft
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author | mcharles |
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date | Wed, 10 Sep 2014 09:18:15 -0400 |
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<tool id="SplitFile2x" name="SplitFile2x" version="0.01"> <description>Split file in 2</description> <command interpreter="perl"> SplitFile2x.pl $input_file $line_number $output_file1 $output_file2 </command> <inputs> <param name="out_format" type="select" label="Format"> <option value="pileup">pileup</option> <option value="fastq">fastq</option> <option value="fastqsanger">fastqsanger</option> <option value="sam">sam</option> <option value="fasta">fasta</option> </param> <param name="input_file" type="data" format="fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable input file from your history"/> <param name="line_number" type="integer" value="4" label="Number of line read at a time before splitting"/> </inputs> <outputs> <data name="output_file1" format="txt" label="PART1 on ${on_string}"> <change_format> <when input="out_format" value="pileup" format="pileup" /> <when input="out_format" value="fastq" format="fastq" /> <when input="out_format" value="sam" format="sam" /> <when input="out_format" value="fasta" format="fasta" /> <when input="out_format" value="fastqsanger" format="fastqsanger" /> </change_format> </data> <data name="output_file2" format="txt" label="PART2 on ${on_string}"> <change_format> <when input="out_format" value="pileup" format="pileup" /> <when input="out_format" value="fastq" format="fastq" /> <when input="out_format" value="sam" format="sam" /> <when input="out_format" value="fasta" format="fasta" /> <when input="out_format" value="fastqsanger" format="fastqsanger" /> </change_format> </data> </outputs> <help> </help> </tool>