view rapsodyn/MergeFile4x.xml @ 2:761fecc07fa9 draft

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<tool id="MergeFile4x" name="MergeFile4x" version="0.01">
<description>Merge splitted file</description>
<command interpreter="perl">
    MergeFile4x.pl $input_file1 $input_file2 $input_file3 $input_file4 > $output_file 
</command>
<inputs>
<param name="out_format" type="select" label="Format">
	<option value="pileup">pileup</option>
	<option value="fastq">fastq</option>
	<option value="fastqsanger">fastqsanger</option>
	<option value="sam">sam</option>
	<option value="fasta">fasta</option>
</param>
<param name="input_file1"  type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 1st file from your history"/>
<param name="input_file2"  type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 2nd file from your history"/>
<param name="input_file3"  type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 3rd file from your history"/>
<param name="input_file4"  type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 4th file from your history"/>
</inputs>
<outputs>
<data name="output_file" format="txt" label="MERGE on ${on_string}">
	<change_format>
		<when input="out_format" value="pileup" format="pileup" />
		<when input="out_format" value="fastq" format="fastq" />
		<when input="out_format" value="fastqsanger" format="fastqsanger" />
		<when input="out_format" value="sam" format="sam" />
		<when input="out_format" value="fasta" format="fasta" />
	</change_format>
</data>
</outputs>

<help>



</help>
</tool>