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362 <h1 class="entry-title ">Degenerate adapter removal tool</h1><hr class="featurette-divider __before_content"> </header>
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363
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364 <div class="entry-content">
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365 <p>The degenerate adapter removal tool is a Python script that removes degenerate primers from sequence datasets.<br />
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366 It can be used on its own as a script, or added as a tool for reproducible research on Galaxy.</p>
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367 <p>Options include removing/not removing adapters from sequences, and keeping/non-keeping sequences where no adapter was found.<br />
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368 Outputs a read file and a text file that contains information on the analysis.</p>
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369 <p>Link to the repository: <a href="https://toolshed.g2.bx.psu.edu/view/megan-shortridge/remove_degenerate_primers/c67912a726cb">https://toolshed.g2.bx.psu.edu/view/megan-shortridge/remove_degenerate_primers/c67912a726cb</a></p>
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370 <p>Link to repository (mercurial) for cloning it: <a href="https://megan-shortridge@toolshed.g2.bx.psu.edu/repos/megan-shortridge/remove_degenerate_primers">https://megan-shortridge@toolshed.g2.bx.psu.edu/repos/megan-shortridge/remove_degenerate_primers</a></p>
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482 <link rel='stylesheet' id='ninja-forms-display-css' href='http://mgtutoringservices.com/wp-content/plugins/ninja-forms/css/ninja-forms-display.css?nf_ver=2.9.25&ver=4.3' type='text/css' media='all' />
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484 <link rel='stylesheet' id='jquery-rating-css' href='http://mgtutoringservices.com/wp-content/plugins/ninja-forms/css/jquery.rating.css?ver=4.3' type='text/css' media='all' />
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485 <script type='text/javascript' src='http://mgtutoringservices.com/wp-content/plugins/jetpack/modules/photon/photon.js?ver=20130122'></script>
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502 <script type='text/javascript' src='http://mgtutoringservices.com/wp-includes/js/jquery/ui/core.min.js?ver=1.11.4'></script>
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507 /* <![CDATA[ */
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510 var decimalPoint = ".";
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513 var ninja_forms_password_strength = {"empty":"Strength indicator","short":"Very weak","bad":"Weak","good":"Medium","strong":"Strong","mismatch":"Mismatch"};
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514 /* ]]> */
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515 </script>
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516 <script type='text/javascript' src='http://mgtutoringservices.com/wp-content/plugins/ninja-forms/js/min/ninja-forms-display.min.js?nf_ver=2.9.25&ver=4.3'></script>
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517 <script type='text/javascript'>
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518 /* <![CDATA[ */
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529 <div class="tc-btt-wrapper"><i class="btt-arrow"></i></div> </body>
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530 </html> |
