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author megan-shortridge
date Wed, 09 Sep 2015 12:44:34 -0400
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362 <h1 class="entry-title ">Degenerate adapter removal tool</h1><hr class="featurette-divider __before_content"> </header>
363
364 <div class="entry-content">
365 <p>The degenerate adapter removal tool is a Python script that removes degenerate primers from sequence datasets.<br />
366 It can be used on its own as a script, or added as a tool for reproducible research on Galaxy.</p>
367 <p>Options include removing/not removing adapters from sequences, and keeping/non-keeping sequences where no adapter was found.<br />
368 Outputs a read file and a text file that contains information on the analysis.</p>
369 <p>Link to the repository: <a href="https://toolshed.g2.bx.psu.edu/view/megan-shortridge/remove_degenerate_primers/c67912a726cb">https://toolshed.g2.bx.psu.edu/view/megan-shortridge/remove_degenerate_primers/c67912a726cb</a></p>
370 <p>Link to repository (mercurial) for cloning it: <a href="https://megan-shortridge@toolshed.g2.bx.psu.edu/repos/megan-shortridge/remove_degenerate_primers">https://megan-shortridge@toolshed.g2.bx.psu.edu/repos/megan-shortridge/remove_degenerate_primers</a></p>
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