# HG changeset patch # User megan-shortridge # Date 1441819645 14400 # Node ID d2b9ccf0b0334b73571badd1329f979f1064b080 # Parent a0b08a76621d9fd7adde84965849ad631ccdc204 Deleted selected files diff -r a0b08a76621d -r d2b9ccf0b033 remove_degenerate_primers --- a/remove_degenerate_primers Wed Sep 09 12:53:25 2015 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,144 +0,0 @@ - - - - - - - - -remove_degenerate_primers: log - - - - - -
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Mercurial > repos > megan-shortridge > remove_degenerate_primers

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ageauthordescription
Wed, 09 Sep 2015 12:52:45 -0400megan-shortridgeUploaded output fasta test filedefault tip
Wed, 09 Sep 2015 12:51:44 -0400megan-shortridgeUploaded test fasta file
Wed, 09 Sep 2015 12:49:37 -0400megan-shortridgeUploaded the Tool Config (XML) file
Wed, 09 Sep 2015 12:44:54 -0400megan-shortridgeDeleted selected files
Wed, 09 Sep 2015 12:44:34 -0400megan-shortridgeUploaded python file
Wed, 09 Sep 2015 11:15:48 -0400megan-shortridgeUploaded
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Degenerate adapter removal tool

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The degenerate adapter removal tool is a Python script that removes degenerate primers from sequence datasets.
-It can be used on its own as a script, or added as a tool for reproducible research on Galaxy.

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Options include removing/not removing adapters from sequences, and keeping/non-keeping sequences where no adapter was found.
-Outputs a read file and a text file that contains information on the analysis.

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Link to the repository: https://toolshed.g2.bx.psu.edu/view/megan-shortridge/remove_degenerate_primers/c67912a726cb

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Link to repository (mercurial) for cloning it: https://megan-shortridge@toolshed.g2.bx.psu.edu/repos/megan-shortridge/remove_degenerate_primers

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- \ No newline at end of file diff -r a0b08a76621d -r d2b9ccf0b033 tmp2uU8iI --- a/tmp2uU8iI Wed Sep 09 12:53:25 2015 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,530 +0,0 @@ - - - - - - - - - - - - - - - - - - Degenerate adapter removal tool | MG Tutoring Services - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
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Degenerate adapter removal tool

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The degenerate adapter removal tool is a Python script that removes degenerate primers from sequence datasets.
-It can be used on its own as a script, or added as a tool for reproducible research on Galaxy.

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Options include removing/not removing adapters from sequences, and keeping/non-keeping sequences where no adapter was found.
-Outputs a read file and a text file that contains information on the analysis.

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Link to the repository: https://toolshed.g2.bx.psu.edu/view/megan-shortridge/remove_degenerate_primers/c67912a726cb

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Link to repository (mercurial) for cloning it: https://megan-shortridge@toolshed.g2.bx.psu.edu/repos/megan-shortridge/remove_degenerate_primers

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