Mercurial > repos > melpetera > tablemerge
comparison TableMerge/README.md @ 1:e44c5246247a draft default tip
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author | melpetera |
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date | Thu, 14 Nov 2019 12:33:41 -0500 |
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1 Table Merge | |
2 ======= | |
3 | |
4 Metadata | |
5 ----------- | |
6 | |
7 * **@name**: Table Merge | |
8 * **@version**: 1.0.1 | |
9 * **@authors**: Melanie Petera (PFEM - INRA - MetaboHUB) | |
10 * **@init date**: 2015, June | |
11 * **@main usage**: This tool merges a data matrix file with a selected metadata file to obtain a single file. | |
12 | |
13 | |
14 Context | |
15 ----------- | |
16 | |
17 This tool is provided as one of the [Workflow4Metabolomics](http://workflow4metabolomics.org) Galaxy instance statistical tools. | |
18 W4M is a French infrastructure providing software tools to process, analyse and annotate metabolomics data. | |
19 | |
20 User interface is based on the Galaxy platform (homepage: https://galaxyproject.org/). It is an open, web-based platform for data intensive biomedical research. | |
21 Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses. | |
22 | |
23 | |
24 Configuration | |
25 ----------- | |
26 | |
27 ### Requirement: | |
28 * R software: version > 3.0.0 recommended | |
29 * Specific R libraries: 'batch' | |
30 | |
31 | |
32 Technical description | |
33 ----------- | |
34 | |
35 Main files: | |
36 | |
37 - tablemerge_script.R: R function (core script) | |
38 - tablemerge_wrap.R: R script to link the main R function to inputs | |
39 - tablemerge.xml: XML wrapper (interface for Galaxy) | |
40 - RcheckLibrary.R and miniTools.R: additional R functions used by the core script (input checks and data handling) | |
41 | |
42 | |
43 Services provided | |
44 ----------- | |
45 | |
46 * Help and support: support@workflow4metabolomics.org | |
47 | |
48 | |
49 License | |
50 ----------- | |
51 | |
52 * Cea Cnrs Inria Logiciel Libre License, version 2.1 (CECILL-2.1) |