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diff tools/networkAnalysis/MetaboRank/MetaboRank.xml @ 7:1436e9cde9c9 draft

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planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 1d31a48bf8328b7a3ad9910971d24b9f453459c5
author metexplore
date Tue, 04 Jul 2023 10:21:26 +0000
parents 7a6f2380fc1d
children 1274e2a62479
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line diff
--- a/tools/networkAnalysis/MetaboRank/MetaboRank.xml	Wed May 17 13:26:37 2023 +0000
+++ b/tools/networkAnalysis/MetaboRank/MetaboRank.xml	Tue Jul 04 10:21:26 2023 +0000
@@ -42,7 +42,19 @@
   <outputs>
     <data format="tsv" name="output"/>
   </outputs>
-  <tests/>
+  <tests>
+    <test>
+      <param name="sbmlFilePath" value="XF_network.sbml"/>
+      <param name="seedsFilePath" value="XF_network_C_Seed.tab"/>
+      <param name="inputSide" value="XF_network_C_Side.tab"/>
+      <output name="output">
+	<assert_contents>
+		<has_n_lines n="1100"/>
+		<has_n_columns n="11"/>
+        </assert_contents>
+      </output>
+    </test>
+  </tests>
   <help><![CDATA[Compute the MetaboRank, a custom personalized PageRank for metabolic network.
 The MetaboRank takes a metabolic network and a list of compounds of interest, and provide a score of relevance for all of the other compounds in the network.
 The MetaboRank can, from metabolomics results, be used to fuel a recommender system highlighting interesting compounds to investigate, retrieve missing identification and drive literature mining.