Mercurial > repos > metexplore > met4j_extractpathways
comparison ExtractPathways.xml @ 1:03a77f9c808d draft
planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c
| author | metexplore |
|---|---|
| date | Mon, 25 Aug 2025 16:05:52 +0000 |
| parents | effdd70905ed |
| children |
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| 0:effdd70905ed | 1:03a77f9c808d |
|---|---|
| 4 <macros> | 4 <macros> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="bio_tools"/> | 7 <expand macro="bio_tools"/> |
| 8 <expand macro="requirements"/> | 8 <expand macro="requirements"/> |
| 9 <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.attributes.ExtractPathways -i "$inputPath" | 9 <command detect_errors="exit_code"><![CDATA[met4j attributes.ExtractPathways -i "$inputPath" |
| 10 -p "$pathwayId" | 10 -p "$pathwayId" |
| 11 -o "$outputPath" | 11 -o "$outputPath" |
| 12 ]]></command> | 12 ]]></command> |
| 13 <inputs> | 13 <inputs> |
| 14 <param argument="-i" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/> | 14 <param argument="-i" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/> |