comparison ExtractPathways.xml @ 3:0e6f2202c787 draft default tip

planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit e757d0398a8407d983f1ef3f900b31cafc26e170
author metexplore
date Wed, 21 Jan 2026 15:28:59 +0000
parents 03a77f9c808d
children
comparison
equal deleted inserted replaced
2:7aad6a36be94 3:0e6f2202c787
19 </param> 19 </param>
20 </inputs> 20 </inputs>
21 <outputs> 21 <outputs>
22 <data format="sbml" name="outputPath"/> 22 <data format="sbml" name="outputPath"/>
23 </outputs> 23 </outputs>
24 <tests> 24 <tests/>
25 <test>
26 <param name="inputPath" value="XF_network.sbml"/>
27 <param name="pathwayId" value="Citric_Acid_Cycle+Folate_Metabolism+toto"/>
28 <output ftype="sbml" name="outputPath">
29 <assert_contents>
30 <is_valid_xml/>
31 <has_line_matching expression=".*&lt;reaction.*" n="17"/>
32 <has_line_matching expression=".*groups:id=.*" n="2"/>
33 </assert_contents>
34 </output>
35 </test>
36 </tests>
37 <help><![CDATA[Extract pathway(s) from a SBML file and create a sub-network SBML file 25 <help><![CDATA[Extract pathway(s) from a SBML file and create a sub-network SBML file
38 @ATTRIBUTION@]]></help> 26 @ATTRIBUTION@]]></help>
39 <citations/> 27 <citations/>
40 </tool> 28 </tool>